| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0445 |
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| Symbol | |
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| ID | 6183138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 396318 |
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| End bp | 397628 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671134 |
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| Product | Homoserine dehydrogenase |
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| Protein accession | YP_001797331 |
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| Protein GI | 171463218 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.68912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.720886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGA TTCAAGTAGG TCTATTAGGT ATTGGCACTG TTGGTGGTGG CGTATTCACT
GTTCTCGAGC GCAACCAGGA TGAGATTGCA CGCCGCGCTG GTCGTGGCAT TCGTATTAAT
ACGGTGGCCG ATCTCAATGT AGAGCGTGCC AAAGAGTTGG TTAAAGATCG CGCACAAGTC
GTGAGTGATG CTCGTGCAGT AATTAATAAT CCAGAGATCG ATATCGTTGT TGAGTTGATT
GGTGGCTACG GCATTGCTAA AGACTTGGTT TTAGAAGCAA TTGCTGCTGG TAAGCATGTA
GTGACGGCCA ATAAGGCCTT AATTGCTGTT CATGGCAATG AGATATTCAA GGCTGCACAC
GCTAAGGGCG TGATGGTGGC GTTTGAGGCC GCTGTTGCTG GTGGCATTCC AATCATTAAA
GCTTTGCGCG AAGGTTTAAC TGCTAACCGT ATTGAATGGA TTGCTGGCAT CATCAATGGC
ACAACGAATT TCATCTTGTC AGAAATGCGT GACAAAGGTT TGGATTTCGA AACTGTTTTA
AAAGAAGCGC AACGTTTAGG ATACGCTGAG GCCGACCCAA CTTTTGATAT TGAAGGCGTT
GATGCTGCGC ATAAAGCGAC CATCATGAGC GCAACTGCAT TTGGCATACC AATGCAGTTC
GAAAAAGCAC ACATTGAAGG CATTACTAAG CTTGCTGCAA TCGATATTCG TTATGCGGAA
CAACTAGGCT ATCGCATTAA GTTACTTGGC ATTGCAAAGA AAACTTCAAC CGGTGTTGAG
TTGCGTGTGC ATCCAACCTT GATCCCTTCA AAACGTTTAA TTGCTAATGT TGAAGGCGCT
ATGAATGCAG TGCAAGTATT TGGTGATGCT GTAGGAACAA CTTTGTATTA CGGTAAGGGT
GCAGGCTCTG AGCCAACCGC TTCTGCTGTG ATTGCGGACT TGGTAGATAT TGCTCGCTTG
CTGAGTGCTG AAGCTGAGCA TCGTGTTCCG TACTTGGCCT TTCAGCCAGA TGCCGTACAT
GACACACCGG TATTGCCTAT TGGCGAGATT ACGACTAGTT ATTACTTGCG TATGCGTGTA
GCTGACCAAG CTGGCGTATT GGCTGATATT ACCAAAATTT TGGCTTCACA CGGTGTTTCA
ATTGACGCAC TCTTGCAAAA AGAGGCTGAC GAGGGCGAAA GTCAAACTGA CTTAGTTGCA
TTGACTCACG AAACCAAAGA AAAGAACATG CTTGCCGCAA TTAAAGAGAT CCAAATTCTT
AAAACCGTTG CTGGCGAAGT GGTGAAGATT CGTTTAGAAA ATCTGTCTTA A
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| Protein sequence | MKPIQVGLLG IGTVGGGVFT VLERNQDEIA RRAGRGIRIN TVADLNVERA KELVKDRAQV
VSDARAVINN PEIDIVVELI GGYGIAKDLV LEAIAAGKHV VTANKALIAV HGNEIFKAAH
AKGVMVAFEA AVAGGIPIIK ALREGLTANR IEWIAGIING TTNFILSEMR DKGLDFETVL
KEAQRLGYAE ADPTFDIEGV DAAHKATIMS ATAFGIPMQF EKAHIEGITK LAAIDIRYAE
QLGYRIKLLG IAKKTSTGVE LRVHPTLIPS KRLIANVEGA MNAVQVFGDA VGTTLYYGKG
AGSEPTASAV IADLVDIARL LSAEAEHRVP YLAFQPDAVH DTPVLPIGEI TTSYYLRMRV
ADQAGVLADI TKILASHGVS IDALLQKEAD EGESQTDLVA LTHETKEKNM LAAIKEIQIL
KTVAGEVVKI RLENLS
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