| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0441 |
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| Symbol | |
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| ID | 6183939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 392920 |
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| End bp | 394611 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671131 |
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| Product | glycosyl transferase family 39 |
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| Protein accession | YP_001797328 |
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| Protein GI | 171463215 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.421293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTTG GCCAAATACG GCAGTCATCA GCCTTACATC CAGACAAGAT TTTGCTGTTG
GTCCTTATTT ATGCCCTTCT CTGGTTTGGC ACCCTGAATT ACCGCCACCT CATTCCATCG
GATGAAGGTC GCTATGCGGA AATCGCCCGA GAAATGCTGG TGACTGGCGA CTGGATTACA
CCGCGCTACA ACGGTTATAA GTATTTTGAA AAACCACCTT TACAAGCATG GGCTACAGCG
GCAGCTTTTC AAGTATTTGG CATTGGTGAT TGGCAAGCAA GACTATGGAC TGCGCTAACT
GGATTCCTCA CCATTCTGTT GATTGGCTTT ACTGGCGCAC GCATTTATAA CGCCAGAGCC
GGATGGTTGG CAGCTGTAGT GCTGGCATCA AGCCCGATGT GGGTCATCAG CGGTCACTTC
AATTCGCTTG ACATGGGCTT ATCTGCATTT TTAGTCGCCG CACTTTGCAG TCTATTGCTG
GCACAAACTT CTCACAACAA AAACAACTGT CGAAATTGGA TGTGGGCATG TTGGGCTTTC
ATGGCGCTAG CAACTTTATC TAAAGGTGTC ATTGGTGCCG CAATTCCTGC GATGGTTTTA
GTTACTTATT CAATCAGCAC TTGGGATTGG AAAATTTGGA CTCGGCTTCG TTTATTTAGC
GGAACTATTT TGTTCCTCGC AATCACTGCA CCATGGTTTG TTTTAGTAGC ACAGCGTAAT
CCAGAGTTTT TGGAATTCTT CTTTATTCAC GAACATCTTC AACGCTTCAC GCAAGACGCT
CACAGCAGAA CAGGTCCTAT TTATTATTTT GTGCCATTAC TGCTAATCGG CCTTCTCCCT
TGGTTTCTTC AACTTCCCGG AGCCATTACC CAGGCCTGGA GCGAACGTCG TCGTGACTTT
TCTGCTGGCT GGCCATTGGT TTGCTGGTTT GTGGTGATAT TTGCCTTCTT CAGCGTTTCG
AGATCAAAGT TACCTGGGTA CATCATCCCC ATTTTCCCAG CGCTCGCCCT GATTATTGGT
AACCGTCTAG ATCGTATGCT TGGTCATACC AATACCATGG CATTACCATG GAAATTGCAA
ACCTTAGGCT TTGCAATTCT TGGATGTGTT GGCTTCTTGT TTTTGGATGC TATTGGCAAA
CAAGCAAGAC CCGATGAAAT TGAAGCGTAT GCGCAATATA CCTATTGGGT AATTTCAGCA
TTACTAGCCC TAATTATTTT TAGCGCTTAT GCCGCATGGC AAAGCAAACG CAATGGCATT
CAAAGCATTG TCAGTTTTGC TTACGGATTT TTTCTGTGCG CCATCATTGC AGGAACAGGT
CACGAGACCT TAGGTCGCGC AGTCTCTGGC ATTGATCTGG TAGAGCGAGT GAAAGCCTCT
ATTCCGGATA AAGTAAATTT CTACTCCGTA CGACTGCTGG ATCATACAGT GCCTTTCTAT
TTAGATAGAA CGATGATCAT GGTGGAATCC CCTGATGAAC TAGAGTTTGG CGTCAATCAA
GAGCCTGAGC TCTGGATACC TACCTTAGAC GCATTTATAG CGCGCTGGAA AGAAGATAAA
ACAGCCTACA CCATGATGGT TCCAGAGTTG TTTGATGCGC TGCAGGCTCA GAACTTTCCA
ATGCAAGAGG TCGATCGCGA TTCGCGCAGA GTTATTGTGA AGCATCCCAA TGGATCCAAC
GCGCCGCAGT AA
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| Protein sequence | MQFGQIRQSS ALHPDKILLL VLIYALLWFG TLNYRHLIPS DEGRYAEIAR EMLVTGDWIT
PRYNGYKYFE KPPLQAWATA AAFQVFGIGD WQARLWTALT GFLTILLIGF TGARIYNARA
GWLAAVVLAS SPMWVISGHF NSLDMGLSAF LVAALCSLLL AQTSHNKNNC RNWMWACWAF
MALATLSKGV IGAAIPAMVL VTYSISTWDW KIWTRLRLFS GTILFLAITA PWFVLVAQRN
PEFLEFFFIH EHLQRFTQDA HSRTGPIYYF VPLLLIGLLP WFLQLPGAIT QAWSERRRDF
SAGWPLVCWF VVIFAFFSVS RSKLPGYIIP IFPALALIIG NRLDRMLGHT NTMALPWKLQ
TLGFAILGCV GFLFLDAIGK QARPDEIEAY AQYTYWVISA LLALIIFSAY AAWQSKRNGI
QSIVSFAYGF FLCAIIAGTG HETLGRAVSG IDLVERVKAS IPDKVNFYSV RLLDHTVPFY
LDRTMIMVES PDELEFGVNQ EPELWIPTLD AFIARWKEDK TAYTMMVPEL FDALQAQNFP
MQEVDRDSRR VIVKHPNGSN APQ
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