Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0428 |
Symbol | rpsF |
ID | 6184114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 381651 |
End bp | 382025 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641671119 |
Product | 30S ribosomal protein S6 |
Protein accession | YP_001797316 |
Protein GI | 171463203 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0360] Ribosomal protein S6 |
TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.531029 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCATT ATGAAATCGT CTTTATCGTC CATCCGGACC AAAGCGAGCA AGTGCCAGCG ATGATCGATC GCTACAAAGC TACATTAGCA GCTGTAGGCG GCAAAATTCA TCGTATGGAA GACTGGGGTC GTCGTCAGAT GGCTTACATG ATCGACAAAC TTGCTAAAGC CCACTACGTT TGCATGAACA TTGAGTGCGA CCAGAAAACT CTGGAAGAAC TCGAGCATGC GTTCAAATTT AACGATGCAG TTTTGCGTCA TCTCATCATC AAGACTAAGA AAGCTGAAAC AGAGCCTTCC ATCATGATGA AAGAAGTGCA ACATGAAGAA GCGCGTAAAT CTGCTCAATC TGACGCTCCT GTAGCGGCAG CCTAA
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Protein sequence | MRHYEIVFIV HPDQSEQVPA MIDRYKATLA AVGGKIHRME DWGRRQMAYM IDKLAKAHYV CMNIECDQKT LEELEHAFKF NDAVLRHLII KTKKAETEPS IMMKEVQHEE ARKSAQSDAP VAAA
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