| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0424 |
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| Symbol | |
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| ID | 6183940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 378139 |
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| End bp | 378714 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641671115 |
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| Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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| Protein accession | YP_001797314 |
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| Protein GI | 171463201 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
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| TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTTTCA ATTTACCTAT TGCCCTGACC TGGTTGCGCG TCACAGCTAT TCCACTGTTA
GTGGCAATCT TTTATTTGCC AAATTCTTGG CTCACCCCAT TTGAAAAGAA TTTGATTGCG
GCAATTATTT TTATCTCTGC TGCTATTACC GATTGGTTAG ATGGTTTTTT GGCGCGTCAT
TTAAAACAAG AATCTGCATT TGGGCAGTTT TTAGACCCGG TCGCCGATAA GTTAATTGTT
GCTGCCGCAT TATTGGTTCT TCTGAATATG GATCGCATGC AAGTTTGGGT GGCACTCATC
ATTATTGGTA GAGAGATTAC GATCTCTGCG CTTAGAGAGT GGATGGCTTT GCTAGGTGCA
GGAAAAAGTG TGGCGGTTCA CATGATTGGA AAGCTGAAAA CGACGGCGCA ATTAGTGGCT
ATACCGTTTT TATTACTCAA TGACACCTTA TTTGGCTGGC TCAATTGTGC ACAAGTAGGT
ACCTGGTTAA TTTGGATTGC CTCTTTTTTA ACGCTTTGGT CGATGTTTTA TTACATGAAA
AAGGCTTTGC CGCAGTTGGT CGGAAAAATC GACTAG
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| Protein sequence | MPFNLPIALT WLRVTAIPLL VAIFYLPNSW LTPFEKNLIA AIIFISAAIT DWLDGFLARH
LKQESAFGQF LDPVADKLIV AAALLVLLNM DRMQVWVALI IIGREITISA LREWMALLGA
GKSVAVHMIG KLKTTAQLVA IPFLLLNDTL FGWLNCAQVG TWLIWIASFL TLWSMFYYMK
KALPQLVGKI D
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