| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0423 |
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| Symbol | |
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| ID | 6183942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 376252 |
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| End bp | 378108 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671114 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_001797313 |
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| Protein GI | 171463200 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGGGGG TATATCGCTT TTTTGATGAA GCGGGACATA TTCTGTATGC AGGCAAAGCT
CGTAACCTTA AAAAGCGTGT ATCCAGTTAT TTTCAACGGA CTCAGTTGTC GCCACGAATT
GAGCTGATGG TAGGCAAAAT TGCCCACTAT GAGACAACGG TAACACGGAC TGAAACCGAA
GCCCTCATTC TAGAGAACAA TCTCATTAAA GAATTGGCTC CCCCGTTCAA TATCCTGTTT
CGTGATGACA AGTCTTACCC TTATGTGATG TTAACGGGGC ATCAATTCCC TAGACTAGCC
TCTTATCGTG GCAAGGTCGA TAAACGTAAT CACTACTTTG GACCATTTCC CAATAGCTGG
GCAGTTCGAA ATAGTGTGCA GATTCTGCAG AAGGTCTTTC GCCTGAGGAC TTGCGAAGAT
TCAGTTTTTA AGAATCGTAG TCGTCCTTGC CTCTTGCATC AGATTCATCG GTGTAGTGCC
CCGTGCGTGG GCCGTCTTAA CGTAGAGCAA TACGGACAAG ACGTCGCTCA AGCTACACGT
TTTTTAGAGG GCGATCATAG TCAAGTCTTA TCGGAACTTG AAAAAGAGAT GCACAAGCAT
AGCGAGGCGA TAGAATTTGA AATGGCCGCG GTATTGCGTG ATCGTATTGC AGATTTATCA
AGCGTTCTAC AGCAGCAATC AATGGATGTA GTTGCGAAAG GTGAGGGCGA TGTCGACATC
ATCGCCGTTG CGCAAATGGA GGGAATGGTA TGCGTAAACC TAGCAATGGT ACGCGGCGGT
CGTCATTTGG GAGATAGGGC TTACTTCCCT AAGGGGTTGC GTACTACTTC TGGCGAGCTG
CCATTCCCTC CGGAAATATT AGAAGCCTTT ATTACTCAGC ATTATTTGGA AGAAAATTCG
AACGAGACAA CCAGCAATTT AATTCCGCCA GTATTGGTTT TAAACCACGC TCTGCAGTCA
GCAAGAGATG ATCTTGCTCA ATTAAATGAA TCTCCACCTG AGGATTTACA TGAATTATTA
AATGCACAGG CTGGTAGAAA GATAACTTTC TTACATCAAC CGCAAGGCCA GAAACGCCAT
TGGCTTGCAA TGGCTGAGGG CAATGCCAAG ATTGCCTTGA CTAAGCGATT GGTGGAGACT
GGTGGGCAAC TGGCAAGAGC GCGCACCTTA GCAGACATAT TAAGTCTTGA ATTAGAAAGT
CTTGAGCAGT TGCGAATTGA ATGTTTTGAT ATTAGTCATA CCTCTGGCGA AGCTACTCAG
GCATCCTGCG TGGTGTATGC GAAAGATGCA ATGCAGTCGA GTGAGTACCG ACGCTTCAAT
ATTAATGACA TCACTCCGGG TGATGATTAC GCAGCGATGC GTCAAGTGTT GCATAGATGT
TATGCTAATT TCCAAGAGTT GCCACTAGAA AAAATTCCGC AAGTGATTTT GATTGATGGC
GGCCAAGGGC AGGTGGAGAT GGCTCGCCAA GTGCTCTCGG AATTTGGCAT GGACATTGGA
TTGATTGTTG GGGTTGCTAA GAGTGAGGGG CGTAAAGTGG GTTTGGAAAC GCTCATTTTT
GCTGATGGGC GTGAGCCCAT GGAGTTGGGT ATTGATAGTG CAGCATTGCT CCTGATTGCT
CAGATAAGAG ATGAGGCTCA CCGCTTTGCT ATCACTGGCA TGCGTGCCAA ACGCGCCAAA
GCAAGAACGA TCTCTCGCCT TGAGGAGATC GAGGGCATTG GCGCTAAGCG CCGTCAAAAG
TTACTGGCCC GCTTTGGCGG GCTAAAAGGG GTTGCAAATG CCAGTATTGA GGAGTTAGCC
AGTGTTGAGG GTGTTTCTTT AACGCTGGCC GAACAAATAT ATCGCCAGCT TCACTAG
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| Protein sequence | MPGVYRFFDE AGHILYAGKA RNLKKRVSSY FQRTQLSPRI ELMVGKIAHY ETTVTRTETE
ALILENNLIK ELAPPFNILF RDDKSYPYVM LTGHQFPRLA SYRGKVDKRN HYFGPFPNSW
AVRNSVQILQ KVFRLRTCED SVFKNRSRPC LLHQIHRCSA PCVGRLNVEQ YGQDVAQATR
FLEGDHSQVL SELEKEMHKH SEAIEFEMAA VLRDRIADLS SVLQQQSMDV VAKGEGDVDI
IAVAQMEGMV CVNLAMVRGG RHLGDRAYFP KGLRTTSGEL PFPPEILEAF ITQHYLEENS
NETTSNLIPP VLVLNHALQS ARDDLAQLNE SPPEDLHELL NAQAGRKITF LHQPQGQKRH
WLAMAEGNAK IALTKRLVET GGQLARARTL ADILSLELES LEQLRIECFD ISHTSGEATQ
ASCVVYAKDA MQSSEYRRFN INDITPGDDY AAMRQVLHRC YANFQELPLE KIPQVILIDG
GQGQVEMARQ VLSEFGMDIG LIVGVAKSEG RKVGLETLIF ADGREPMELG IDSAALLLIA
QIRDEAHRFA ITGMRAKRAK ARTISRLEEI EGIGAKRRQK LLARFGGLKG VANASIEELA
SVEGVSLTLA EQIYRQLH
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