Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0415 |
Symbol | recO |
ID | 6183213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 370412 |
End bp | 371146 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641671108 |
Product | DNA repair protein RecO |
Protein accession | YP_001797307 |
Protein GI | 171463194 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCGA TTCGTGTTGC TGACGAACCT GCTTTTGTAT TGCATAGTAT TCCCTATAAA GAGACGAGCT TAATTCTGGA TGTCTTTACG CGGCAATATG GCCGCATGGC TTTAATTGCC AAAGGTGCTA AGCGCCAACA CTCGACATTG CGCCCGGTTC TTCAACGTTT TCAGCCCCTA TTGGTTTCAT GGAGCGGCAA ATCTGAGCTG CGAACCCTCA CTAAATCGGA GTGGGTGGGT GGTATGCCAT CTTTGGTTGG TGATGCCTTG CTTTGTGGTT TTTATTTAAA TGAGCTACTC GTGAAGTTTT TGGCGCGTGA AGATGATTAC GAAAAACTCT ACGATCGTTA CGCAGAAACA ATTAATGCCT TATCTAATTT AGAGTTTGAG TCCAAGGGTC TGGAAGAAAT TCTGCGCCAA TTTGAGTTGT CACTCTTGCA AGAGACGGGG TATGCTGCTG CTTTAGACCG TTGCGTGGAA AACAATGAGG CGCCATTGGC TCAAGAGCAA TATGTTTATC AGCCAGAGCG TGGTGTGCGA CCTGTGCAGG TGGATGACCC TGGGCATTGG CCGGTTCTGA CCGGAAAATC ACTCCTAGCC ATAGCTATTA GTGATTTTTC TGATCCAGAG ACGCTTTCAG AGAGCAAGCA GTTGATGCGC TTTCTGTTAG GTTTGCACTT GCAGGATCAG GTGCTGACGA CACGTCAAAT TTTGATTGAT CTGAAGAAAA TCTAG
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Protein sequence | MASIRVADEP AFVLHSIPYK ETSLILDVFT RQYGRMALIA KGAKRQHSTL RPVLQRFQPL LVSWSGKSEL RTLTKSEWVG GMPSLVGDAL LCGFYLNELL VKFLAREDDY EKLYDRYAET INALSNLEFE SKGLEEILRQ FELSLLQETG YAAALDRCVE NNEAPLAQEQ YVYQPERGVR PVQVDDPGHW PVLTGKSLLA IAISDFSDPE TLSESKQLMR FLLGLHLQDQ VLTTRQILID LKKI
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