Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0409 |
Symbol | |
ID | 6184263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 363177 |
End bp | 364424 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641671102 |
Product | 3-oxoacyl-(acyl carrier protein) synthase II |
Protein accession | YP_001797301 |
Protein GI | 171463188 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.678663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGCAT CAAATGGCCG ACGCCGGGTA GTAGTCACCG GCCTTGGCCT CATTTCACCT GTTGGTAATT CAGTTGATGT AGCTTGGTCT AATTTGCTCG CGAGCAAATC AGGCATTGCC ACCATCACCA AGTTTGACCA CACTCTGCTT AATGTTCATT TCGCTGGAGA GGTGAAAGAT TTCAATGTCG AAGAATATGT TTCCGCTAAA GAAGCGCGTC ATATGGATAC TTTTATCCAT TACGGTATCG CTGCTGGCAC GCAAGCTATT CGCGACAGTG GTTTAGAGAT CACAGAACAA AACGCCGAGC GCGTTGGTGT GATGGTGGGT TCCGGTATCG GCGGCCTGCC AATGATTGAG GAAACCGGCG CAGAGCTCTT GGCTCGTGGC CCTCGTCGTA TTTCACCATT CTTTGTTCCA GGCTCGATCA TCAATATGAT TTCTGGCCAC CTCAGTATTT TGTTTGGCCT TAAAGGCCCA AACGTTGCTG CGGTAACGGC CTGCACAACC GGTTTGCATA GTATTGGTTT AGCTGCTCGC TTAATTCAGT ACGGCGATGT TGATGTGATG GTTGCTGGCG GCGCTGAATC AACCATCTCC GCTTTGGGCG TTGGTGGGTT TGCTTCTGCA AGAGCGCTCT CTACTCGTAA TGATGATCCT GCTACTGCGT CGCGCCCTTG GGATAAAGAC CGTGATGGTT TTGTTCTCGG TGAAGGTGCT GGTGTTGTCG TGCTTGAAGA GTATGAGCAT GCAAAAGCAC GTGGCGCAAA AATTTATTGC GAGCTACTTG GCTTCGGTAT GAGTGGTGAC GCGTATCACA TGACTGCCCC AAATATGGAC GGTCCACGTC GTTGCATGGT CAACGCAATG CGCGATGCCA AACTCAATCC AGACCAAATT CAGTATTTGA ATGCCCATGG AACTTCCACG CCTCTGGGTG ATAAGAATGA AACTGAGGCG ATTAAGGCGG CTTTGGGCGA TCACGCTAAA AAGGCTTTAA TTAACTCCAC TAAGTCGATG ACTGGCCATC TTTTGGGCGG CGCTGGCGGC CTGGAATCTG TATTTACTAT TCTGGCCCTT CATAACCAGA AATCGCCACC TACTATCAAC ATCTTCAATC AAGACCCTGA GTGTGATTTG GACTACTGCG CTAATATCGC TAGGGATGTG AAGATCGATC ATGCAGTCAA AAACAATTTT GGCTTTGGGG GTACTAACGG TACCTTGATT TTTGGCAAAC TGACCTAA
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Protein sequence | MSASNGRRRV VVTGLGLISP VGNSVDVAWS NLLASKSGIA TITKFDHTLL NVHFAGEVKD FNVEEYVSAK EARHMDTFIH YGIAAGTQAI RDSGLEITEQ NAERVGVMVG SGIGGLPMIE ETGAELLARG PRRISPFFVP GSIINMISGH LSILFGLKGP NVAAVTACTT GLHSIGLAAR LIQYGDVDVM VAGGAESTIS ALGVGGFASA RALSTRNDDP ATASRPWDKD RDGFVLGEGA GVVVLEEYEH AKARGAKIYC ELLGFGMSGD AYHMTAPNMD GPRRCMVNAM RDAKLNPDQI QYLNAHGTST PLGDKNETEA IKAALGDHAK KALINSTKSM TGHLLGGAGG LESVFTILAL HNQKSPPTIN IFNQDPECDL DYCANIARDV KIDHAVKNNF GFGGTNGTLI FGKLT
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