| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0407 |
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| Symbol | |
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| ID | 6184254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 362071 |
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| End bp | 362814 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671100 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_001797299 |
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| Protein GI | 171463186 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.436635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 84 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCG ACTTGAGCGG ACAAATTGCT TTAGTAACTG GCGCCTCACG CGGCATTGGT
CAGGCGATTG CAGATGAGTT GGTCAAGTGC GGCGCCAAGG TAATTGGTAC CGCTACTTCA
GAGAGCGGCG CTAAAGCGAT CGATGAGCGT TTAAAAGCTT CGGGCGGTGT TGGCAAGGTG
TTGAATGTTA CAGCATCAAA TGCTTGTGAA GAAATCATTG ACTTGATCGT GAAAGAATAT
GGTGGCATCA ACATCTTGGT AAACAACGCT GGTATCACGC GTGATAACTT GGCAATGCGC
ATGAAGTTTG AAGAGTGGAC TGATGTGATT GATACCAACT TAAGTTCAGT CTTCCGTCTT
TCTCAGGCAG TCATGCGTCC CATGATGAAG GCTCGTGGTG GTCGCATTAT CAATATCACC
TCTATTGTTA GTCACATGGG AAATCCTGGT CAGACAAATT ACGCTGCTGC AAAAGCAGGC
GTTTCTGGCA TGACTCGTGC TTTAGCCCGT GAAATCGGTA GCCGTAATAT TACCGTGAAT
TGCGTGGCGC CTGGATTTAT TGATACTGAT ATGACCCGCG CTTTGAGTGA AGAGCAGCAA
AATGCCTTAA AAGTGAACAT TCCTTTGGCT AGATTGGGTA GTCCTGAGGA TGTGGCTCAG
GCAGTGGCAT TTTTGGCTTC TCCAGCAGCT GGCTACATTA CGGGTAATAC CCTACACGTC
AATGGCGGAC TATATTTAGC CTAA
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| Protein sequence | MNLDLSGQIA LVTGASRGIG QAIADELVKC GAKVIGTATS ESGAKAIDER LKASGGVGKV
LNVTASNACE EIIDLIVKEY GGINILVNNA GITRDNLAMR MKFEEWTDVI DTNLSSVFRL
SQAVMRPMMK ARGGRIINIT SIVSHMGNPG QTNYAAAKAG VSGMTRALAR EIGSRNITVN
CVAPGFIDTD MTRALSEEQQ NALKVNIPLA RLGSPEDVAQ AVAFLASPAA GYITGNTLHV
NGGLYLA
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