Gene Pnec_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0388 
Symbol 
ID6184603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp345765 
End bp346301 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content46% 
IMG OID641671084 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001797283 
Protein GI171463170 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTGTG GTGGCGGTGA TGCAGCTCTA GACTGGGCAA TTCATTTCTG TGAAATTGCA 
GCTAGCGTTA CCTTGATTCA TCGTCGCGAT GATTTCAAGG CTGCCCCAAA ATCGACTGTC
AAAATGCGAG AGCTTTGTAA CTCCAATCGG TTGCAGCTTT TAATTGAGCA AGCAACCACA
TATGAATCGC AAGAGGATTG CCTGACGGGG CTGACTTTCA CCAATACTGA GGGCGAAACA
CAACAGCTCC CATTTGATGA TCTTTTGGTA TTTTTTGGGC TATCTCCCAA ACTAGGACCA
ATCTCAGATT GGGGTCTCAA TTTAGACCGC AAGCAAATTT GCATAGATAC CCAGAAATTT
CAAACCAGCG TTCCTGGAAT TTATGCAGTT GGCGACATCA ACGTTTATCC AGGCAAAAAA
AACTCATTCT GTCCGGGTTT CACGAGGCCG CCTTTGCCGC TGCGAGTACC TCAACCCAGA
AAAACAGACT CCGCTTCAAT ATACGACCAC CTCACCCAAG CTCCACAAAG CACTTAG
 
Protein sequence
MICGGGDAAL DWAIHFCEIA ASVTLIHRRD DFKAAPKSTV KMRELCNSNR LQLLIEQATT 
YESQEDCLTG LTFTNTEGET QQLPFDDLLV FFGLSPKLGP ISDWGLNLDR KQICIDTQKF
QTSVPGIYAV GDINVYPGKK NSFCPGFTRP PLPLRVPQPR KTDSASIYDH LTQAPQST