Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0388 |
Symbol | |
ID | 6184603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 345765 |
End bp | 346301 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641671084 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_001797283 |
Protein GI | 171463170 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTTGTG GTGGCGGTGA TGCAGCTCTA GACTGGGCAA TTCATTTCTG TGAAATTGCA GCTAGCGTTA CCTTGATTCA TCGTCGCGAT GATTTCAAGG CTGCCCCAAA ATCGACTGTC AAAATGCGAG AGCTTTGTAA CTCCAATCGG TTGCAGCTTT TAATTGAGCA AGCAACCACA TATGAATCGC AAGAGGATTG CCTGACGGGG CTGACTTTCA CCAATACTGA GGGCGAAACA CAACAGCTCC CATTTGATGA TCTTTTGGTA TTTTTTGGGC TATCTCCCAA ACTAGGACCA ATCTCAGATT GGGGTCTCAA TTTAGACCGC AAGCAAATTT GCATAGATAC CCAGAAATTT CAAACCAGCG TTCCTGGAAT TTATGCAGTT GGCGACATCA ACGTTTATCC AGGCAAAAAA AACTCATTCT GTCCGGGTTT CACGAGGCCG CCTTTGCCGC TGCGAGTACC TCAACCCAGA AAAACAGACT CCGCTTCAAT ATACGACCAC CTCACCCAAG CTCCACAAAG CACTTAG
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Protein sequence | MICGGGDAAL DWAIHFCEIA ASVTLIHRRD DFKAAPKSTV KMRELCNSNR LQLLIEQATT YESQEDCLTG LTFTNTEGET QQLPFDDLLV FFGLSPKLGP ISDWGLNLDR KQICIDTQKF QTSVPGIYAV GDINVYPGKK NSFCPGFTRP PLPLRVPQPR KTDSASIYDH LTQAPQST
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