| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0386 |
|---|
| Symbol | |
|---|
| ID | 6184030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 344400 |
|---|
| End bp | 344888 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641671082 |
|---|
| Product | Dihydrofolate reductase |
|---|
| Protein accession | YP_001797281 |
|---|
| Protein GI | 171463168 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAC CCGCCATTTC GATGATTGTT GCGCGCTCAC GTAATCACGT GATTGGTCGT
GACAATCAGA TGCCCTGGAA AATCTCAGCC GATCTGCAGT TCTTTAAACG CGTCACTATG
GGGCATCCTG TCATTATGGG CCGCAAGACT TGGGAATCTA TTGGTCGCTC ACTGCCTGGT
CGTCGCAATA TCGTTGTAAG TCGCAATGCT AGCTATCCAA TCAGCGGCGG AGAGTTGGTT
GGATCCCTAG ATGAGGCTTT GAAGAGCTTA AATGAGTTCC CACGAGTATT TGTGATTGGT
GGCGAACAGC TCTTTAGGCA AGCGTTTGAT AAGGCGGATC GTCTTTACAT CACTGAAATT
GATTTAGACA TTGAGGGTGG TGACACCTTC TTTGAGGTGC CTAATGCGTC AGCATGGAAA
GAGGTTGAGC GCACCCCGGG TTCCGAGGGT GAGATCACCT TTAGCTTTAT CACTTTAGAG
TGTAAATAA
|
|---|
| Protein sequence | MTQPAISMIV ARSRNHVIGR DNQMPWKISA DLQFFKRVTM GHPVIMGRKT WESIGRSLPG
RRNIVVSRNA SYPISGGELV GSLDEALKSL NEFPRVFVIG GEQLFRQAFD KADRLYITEI
DLDIEGGDTF FEVPNASAWK EVERTPGSEG EITFSFITLE CK
|
|---|
| |