Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0385 |
Symbol | |
ID | 6184001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 343547 |
End bp | 344359 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641671081 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001797280 |
Protein GI | 171463167 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGTGC GCTTTATTGC TGTTGGCATT TTTGCTGGCG CTTCTTTAGG GCATACCTGG GCGCAACAAA GTGGCTTGCC GATTAATGCT GCGGCATCTG TTAACGGTGT AATTATTACC AACGACATGG TAGAACAAGG AATTAAAGCA GCTCTCTCAC AAGGTCAAAA AGATTCGCCA GAATTGCGTA AAGCAGTTGT TGAAAAATTC ATTAAAGTGT TATTGCTGTC TCAGCAAGCA GAAAAAGATG GCTTAGCTAA TTCTGAAAGA GCTAATACGC AGTTAGCGAT GATTCGCCAG AACTATTTAG CTGACCTTGA GATGTCTACA TACATGTCAA AAAATCCCAT CACTGATGCA GATGTTCAAG CCGAGTACAA CAAGGAAATT GCATCCCTAA GCCCTCAGGG CATGATTGTT GAATACAAGG TAAGTGATAT TGCGGTGGCT ACCGAAGCCG ATGCTCAAGC AGCTTTAGCG CGTATTAAAA AAGGCGAGGC ATTTGATAAG GTTGCTAAGA GCGTTTCTTT GGCTCCAAAC AAGGTGCAAG GCGGAGCTGT GGGCTGGATT CAGCCTGGTC AAGTCGCTCC ACAATTGGCC TCCACATTAA CCACCCTTTC TAAGGGCCAG GTATCGCCTG CGCCAATTCA GATGCAGCAA GGTTGGTACT TGATCAAGTT AGAAGATAAA AAATCAAGCA AGCTACCTTC ATTTGAGCAA GCAAAGCAAG CTATTCGTAC TGGATTAACG CAAAGAAAGC AATTTGAGTT TTTAGGTCAG ATTGCAAAAG ATGCCAAGAT TGTTGTTCAG TAG
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Protein sequence | MMVRFIAVGI FAGASLGHTW AQQSGLPINA AASVNGVIIT NDMVEQGIKA ALSQGQKDSP ELRKAVVEKF IKVLLLSQQA EKDGLANSER ANTQLAMIRQ NYLADLEMST YMSKNPITDA DVQAEYNKEI ASLSPQGMIV EYKVSDIAVA TEADAQAALA RIKKGEAFDK VAKSVSLAPN KVQGGAVGWI QPGQVAPQLA STLTTLSKGQ VSPAPIQMQQ GWYLIKLEDK KSSKLPSFEQ AKQAIRTGLT QRKQFEFLGQ IAKDAKIVVQ
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