Gene Pnec_0370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0370 
Symbol 
ID6184398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp334876 
End bp335283 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content45% 
IMG OID641671070 
ProductBLUF domain protein 
Protein accessionYP_001797269 
Protein GI171463156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.943321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAT CAAAAGATCT GGTTGAATTG AGTTATCTGA GCGAAGCAGT CTTGGATATG 
TCTTTTCTTG GCTTAATGCG CTTGCTGGAG TCGGCGCGTG CTTTTAATAA AAACAATGGC 
ATTACCGGTA TTCTTTTATA CGACAACCAG CAGTTCGAGC AAATCATCGA AGGTGAACGT 
GCAAGCGTGA TGAAGGCTTG GAAGCGAATT CAGGAAGATA AGCGTCATCA TCGGGTTGAG 
CTCTTAGAAA TTTGTGAGAT TCCAGAGTGT AACTATCCGG AATGGTTGTT GCGTTTTTAT 
GGCGGCGAAA CGCTGACGCG AGACTACCCA GCGCTCGCTC AGATGGTTGG TGGTATGGAT 
AAGCATAGTC TTGCCTTAAT GAACAAGATG CGCGCCAGTC AGACCTAA
 
Protein sequence
MSKSKDLVEL SYLSEAVLDM SFLGLMRLLE SARAFNKNNG ITGILLYDNQ QFEQIIEGER 
ASVMKAWKRI QEDKRHHRVE LLEICEIPEC NYPEWLLRFY GGETLTRDYP ALAQMVGGMD 
KHSLALMNKM RASQT