| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0365 |
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| Symbol | |
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| ID | 6182906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 328570 |
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| End bp | 329562 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671068 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001797267 |
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| Protein GI | 171463154 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAT GTTTATCTAA TAATTTGAGC GATATGCAGA ACGCGCAGCC AGCAGTATTG
GCCGCTAAAG AGCTGCTAGC GCACGCCATG GCTCCGGTCT ATCGAGTCGT TAATGGCTTA
CTCGTTGTAA CTGTATTTAT GGTGGTTGGC CTTTGGCTCT CAGGTAACGG TACTAATGCC
GGCGCTTTTG ACTTGGCCCG CATCCTTGTT CCCGATGAGG CGCGTCATAT GGTTTGGAGC
AATGGCTTTG GCATGCTCAA CCAATATAAA GACGCTAATG AAGTGGCTGC TTCCCCGGCT
GCTGGTACTG AAATCGCAGC GGTGATCTAT AACAAGTCCA AATTGTCGGC CACTACTGGC
CTGGCAAGTG CTAAGCAGCA GACAGTTGCT TTGCTGATGC CGTCAGTAGC GCAAATGCAG
GTTAAGTCGA TTTCCCATTT ATCGGATCGT ATTCCGACTT CAAAGATTGA CCCCCAGGCT
TTAGATAGCA ACCTTATGGG TTCTTTGCAG AATCAACGAG CGGTAGCGGA TTTCTTTGAG
AAGAAGTACA ACCTCGATCG CTCCAAGATT GAAGAGTATG TTTCCAACAC CATCTTGATT
GCCAAAGAAG TCAATATTGA TCCCGTGCTT TTATTGGCAG TGATTTCAGT GGAATCTAAC
TTTAATCCCA ATACCAAAAG TCATGCTGGC GCTGAAGGCT TAATGCAAGT AATGACTTCT
GTGCATAAAG ATAAGTATGC AATTTTTGGC GGCACCTCTG AGGCTGTTAA ACCAGAAGTC
AATATTCGTG TTGGCGCCTA TATCCTGAAG TATCTGATTG CTACAACCGG CTCATTACGT
AATGGTTTGA AGTATTACGT TGGCGCTGCT AATGCAGAAG ACGACGGCGG CTATGCTGAC
AAAGTTATGG CGGAAAGAAA TCGTCTTATT GGCTTATGTC AAAACCGCTC CTCGAATCGT
CTTACATTGA ATGGCAAGGA CTTGCGCTCT TGA
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| Protein sequence | MSKCLSNNLS DMQNAQPAVL AAKELLAHAM APVYRVVNGL LVVTVFMVVG LWLSGNGTNA
GAFDLARILV PDEARHMVWS NGFGMLNQYK DANEVAASPA AGTEIAAVIY NKSKLSATTG
LASAKQQTVA LLMPSVAQMQ VKSISHLSDR IPTSKIDPQA LDSNLMGSLQ NQRAVADFFE
KKYNLDRSKI EEYVSNTILI AKEVNIDPVL LLAVISVESN FNPNTKSHAG AEGLMQVMTS
VHKDKYAIFG GTSEAVKPEV NIRVGAYILK YLIATTGSLR NGLKYYVGAA NAEDDGGYAD
KVMAERNRLI GLCQNRSSNR LTLNGKDLRS
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