| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0364 |
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| Symbol | |
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| ID | 6184032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 327039 |
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| End bp | 328064 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671067 |
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| Product | DNA/RNA non-specific endonuclease |
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| Protein accession | YP_001797266 |
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| Protein GI | 171463153 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.761571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCC TTCGTAGTCT TCTCACCCTT GTAGCGCTCT CCGCTTCACT GACTGCTCTT
GCCGCATTTG ATGACTGCAA AGATCCTTTC CCGCGCCAGC AAATACCGAC AACCAGCCAG
GCCGGACGAG ATCTCTGCTT TGATAGCTTC GCGATTTATT ACTCCCCTCA AGATAAGAAA
CCGATCTATA CGATTGAAAA ACTCAACAAG AATCAACTCT CGGCTCCGCA CCCACGTAGA
AGCAATCAAT TCTATGAAGA GGCTAGACTG CCTTTCTCTG AGCGAGCGCT GCTTTCAGAT
TACCGTGGCA GCGGTTATGA CCGGGGCCAT AACGCGCCTG CGGGAGATAT GAACAATGAA
CGTTCAATGG CACAATCATT CTCATTAGCA AACATGATGC CCCAGGCAAA ACAAAACAAT
CGGGGTATCT GGGCAAAGAA TGTTGAGGAG CCAACAAGGG CCTATGTCAA GAGAGCGGCC
GGGGATGTTT ATGTGTTCAC TGGATCCATT GGTAATAGTG GAAGCATTGG CAGAAGTCAC
GTCACAATTC CAAGCCGTCT ATATAAATTG GTTTACGACC CAAGTAAAAA TGCAGCCTGG
GCTTATTGGA TTGAGAACAC CAATGAAGCC AAGATGACAC CGCCCATCTC TTATAAAGAG
TTAGTTCAAA AAACAGGGAT TGATTTTCAC TTACCAGTTG ATAGCGATGC AACTACTCCA
AACACCGTAA GCGCAGAACT CCCGAAATCA TTGGGCCAGA AGCCATTTTT TGGTGACTGG
TATCCGGTAT TTTTTGATGC GTACTCATCT AACAAGCTCA ATGGAATCAT TGACAATATC
AAAGCAGGCA AGGTGGAAAG CATTCAAATT CAATATGATC ACAACGAAAC ACTTGCCAAA
CAAATCGCTG CGCAAATTCA GTCGCAAACT CAGCTAACGA CTATGCTGAT GCAAAGCAGC
CCTCCAGAAT CCGCAACTGT GACTTACGAA CGCAATCGAG TCACTCTGAT TGTTCGTTCA
AAGTAA
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| Protein sequence | MKSLRSLLTL VALSASLTAL AAFDDCKDPF PRQQIPTTSQ AGRDLCFDSF AIYYSPQDKK
PIYTIEKLNK NQLSAPHPRR SNQFYEEARL PFSERALLSD YRGSGYDRGH NAPAGDMNNE
RSMAQSFSLA NMMPQAKQNN RGIWAKNVEE PTRAYVKRAA GDVYVFTGSI GNSGSIGRSH
VTIPSRLYKL VYDPSKNAAW AYWIENTNEA KMTPPISYKE LVQKTGIDFH LPVDSDATTP
NTVSAELPKS LGQKPFFGDW YPVFFDAYSS NKLNGIIDNI KAGKVESIQI QYDHNETLAK
QIAAQIQSQT QLTTMLMQSS PPESATVTYE RNRVTLIVRS K
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