Gene Pnec_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0347 
Symbol 
ID6182835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp316675 
End bp317718 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content38% 
IMG OID641671054 
Producthypothetical protein 
Protein accessionYP_001797253 
Protein GI171463140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.337715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCTT ACTATATAGT CGCACCAAGA TATATACGCA CTTCTGCAGG AGTAAGGGTT 
TTATACAAAC TTTGCGACCT AATCAATAAA GCAGGCGGGT CCGCTTTCAT TTACCTCAGA 
CCCTATTCTG ATCCGGATTT ATCTTGCTCA CCTTTTGATG TAGCCCCATT CCTGACAAGC 
AAAATTGCTA GCTACCATTT TGAAAATGGT CTTACACCCA TCATTATTTA CCCAGAGGTT 
TTTAATATAG AACTTTTTGA TGCCCCATTC AAGGTGCGAT ACCTCCTCAA CTATAACCAA 
CTATTATTTT CAAACGACGC ATTAGATGAG GATGATTACC TCCTAACATA CAGTGAAAAT 
ATTGCTCAAC AAATTAATCT AAACAAACCT ACTTCAACTA TTTTTTTACC AGTTTCTGAT 
CCTATTTTCT ACTCACCTCC GGCCGTTGAA AATAGGCATG GCGCTGTTTT CTATGCCGGA 
AAATTTAAAT GCCACTTTGG CAGAAAAACT TTTCCCATAA CAGAGGGCTT GCCTGAAATC 
ACAAGAGATA AGGCAGATTC GCAAACACCG GAAGAAATAC GAAAGCTTTT TCAAGAAAGT 
GAGTTTTTTT ATTGCTACGA AGATTCCGCG CTTGCTTTAG AGGCAATGCT TTGCGGCTGC 
CCGACGATCT TTCTTCCAAA TGAGCATTTT CAAAAAACTC TGGGGGGCAA TGAACTATTA 
GGATTGGGCT ATGCCTGGGG TACCAATGAA CAACAGATTG AACATGCTAA ACAAACGGTG 
TACCTACTTC GAGAGCGGTA CCTAGAACTG CTAGATTTAG CCAATAAAGA AGTGACCCAC 
TTTATTCATA AGACCCAATT AATGGTGAAA AATGTACCGT ATATCAAACC GTTTGCACCA 
AATAGAATCC ATAAATCATC CTGGCTACAA AGAGCAGAAA ATTTAGTTTA TTTTTTACTG 
GATAACATTG AAGATAAAGG TCTAATTGCA ACAGCAAAGA TTATTTATAA ACGGATCTCA 
TCAAATAGAT TGAAGCTTTT TTAA
 
Protein sequence
MNPYYIVAPR YIRTSAGVRV LYKLCDLINK AGGSAFIYLR PYSDPDLSCS PFDVAPFLTS 
KIASYHFENG LTPIIIYPEV FNIELFDAPF KVRYLLNYNQ LLFSNDALDE DDYLLTYSEN 
IAQQINLNKP TSTIFLPVSD PIFYSPPAVE NRHGAVFYAG KFKCHFGRKT FPITEGLPEI 
TRDKADSQTP EEIRKLFQES EFFYCYEDSA LALEAMLCGC PTIFLPNEHF QKTLGGNELL 
GLGYAWGTNE QQIEHAKQTV YLLRERYLEL LDLANKEVTH FIHKTQLMVK NVPYIKPFAP 
NRIHKSSWLQ RAENLVYFLL DNIEDKGLIA TAKIIYKRIS SNRLKLF