Gene Pnec_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0333 
Symbol 
ID6184064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp295585 
End bp296676 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content41% 
IMG OID641671040 
ProductN-acetylneuraminic acid synthase, N-terminal domain 
Protein accessionYP_001797239 
Protein GI171463126 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.331281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.664973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGA ACGGAATTTT TGAAGATTTA TTTGTGCTTG AAATGGCGAG CAATCACCAG 
GGTAGCGTAG AGCGAGGCTT GCAAATTATT AGCGCTTTCT CTAAAGTGGT TCGCTTTAAT
AATGTACGTG CTGCGATCAA ACTTCAATTT CGTGATATTG ACAATTTCGT GCACAAAGAC
TTTGTAGGTC GCGATGACAT TAGATATGTT AAGCGACTTG CCGACACAAA AATGTCTAAA
CAAGATTTTG GAATTTTGGT AGATGCCATT CGCAAAAGTG GCTGTATCCC AATGTCCACT
CCATTTGATG AAAAGTCTGT CGATTGGTGC GTAGAGTTTG ACATGCCTAT TATTAAGGTT
GCAAGTGCGG ACAACAATGA CTGGACCTTG CTTGAGAAGA TTGCTACCAC TAAAAAGCCT
GTGATTATCT CTACTGGCGG TATGACGCAA AAAGATATGG ATGATGTGGT CCATTTCTTT
ACAAGCAGAA ATATTACTTT GTCTTTAAAT CACTGTATTG CCGCTTACCC TCACGAAGAT
AATGAGTGTG AATTAAATCA AATTGATTAC CTACGTCATC GCTATCCGGA TTTAGTGATT
GGTTACTCTT GCCATGAGTA TCATGACTGG TCGGCGTCAA TGTACATTGC ATATGGCAAA
GGTGCGCGCA CTTTTGAGCG ACATATTGAT ATCAATGATG ATGGTTTTCA AGTTGCTACA
TACTCATCCT TGCCAGGGCA AATTGATACT TGGTTTAAAG CTTGGCATAA AGCCCAGGAG
ATGTGTGGGA CCTCGGGAAA TCACAGAAGA AATTTTATTG ACCGAGAAAT TGCATATTTA
GATTCATATG TACGCGGTGT ATATGCCAAG CGCGATCTAG TTGCTGGCCA AACATTGAGC
GAGGATGATT ACTACATGGC TATTCCATTG CAAAAAGGCC AGGTTTCCAG TCGCGAACTT
ATGCTTGGCA AATATGGTCA TAAATTGCTA ACGGATTGCA AAAAAGACGA GCCTATTACT
GTGCGTATTT TGGATACGCC ATACTCTGCC GACCCTGCAA TGCTTGAATC TTTCAGTAAA
CGAGGTTTAT AA
 
Protein sequence
MMKNGIFEDL FVLEMASNHQ GSVERGLQII SAFSKVVRFN NVRAAIKLQF RDIDNFVHKD 
FVGRDDIRYV KRLADTKMSK QDFGILVDAI RKSGCIPMST PFDEKSVDWC VEFDMPIIKV
ASADNNDWTL LEKIATTKKP VIISTGGMTQ KDMDDVVHFF TSRNITLSLN HCIAAYPHED
NECELNQIDY LRHRYPDLVI GYSCHEYHDW SASMYIAYGK GARTFERHID INDDGFQVAT
YSSLPGQIDT WFKAWHKAQE MCGTSGNHRR NFIDREIAYL DSYVRGVYAK RDLVAGQTLS
EDDYYMAIPL QKGQVSSREL MLGKYGHKLL TDCKKDEPIT VRILDTPYSA DPAMLESFSK
RGL