| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0331 |
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| Symbol | |
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| ID | 6184165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 293652 |
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| End bp | 294425 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671038 |
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| Product | glucose-1-phosphate cytidylyltransferase |
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| Protein accession | YP_001797237 |
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| Protein GI | 171463124 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0192457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.967948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCCG TGATCTTAGC AGGGGGTTTG GGTACTCGAA TTGCAGAGGA AACATCTTCA
CGGCCAAAGC CAATGGTGGA GGTCGGTGGT AAGCCCATCC TTTGGCACAT TATGAAGATG
TATTCAGCTC ACGGGGTTAA TGATTTTGTT ATTTGCTGTG GTTATAAGGG TTACATGATC
AAGGAATATT TTGCGAACTA TTTCCTTCAC ATGTCTGATG TTACTTTTGA CATGGCAAAT
AACAACGCCA TGCAAATTCA CCAGCAGTAT GCTGAGCCTT GGAAAATTAC GCTTATTGAT
ACCGGTGAAA ATACGCTAAC TGGCGGTCGA CTTAAGCGTG TCCGTAAGTA TTTGGGTGAT
GATGACTTTT GTTTTACTTA TGGTGATGGC GTAGGTGATG TTGATCTTAC ACGTTTGATA
GCCTTTCACA AGACGCATGG GAAGCAAGCA ACTGTGACTG CAGTTCAGCC GCCCGGTCGT
TTCGGCGCAC TTGATATGAA AGGCGCCGCA GTGGAGAGTT TTGTTGAAAA GCCACATGGC
GATGGCATGT ATATAAATGG CGGGTTTTTT GTTCTTTCCC CCAAGGTAAT TGATTTAATT
GAAGATGACA GCACAATCTG GGAGCGCAAG CCGCTAGAGG CTCTTGCTAA GTCAAACCAG
CTTCAGGCCT TTACCCATAA TGGGTTTTGG CAGCCCATGG ATACTTTGCG TGATAAACAG
TACCTTGAAG AGTTGTGGGC TGGGGGTAGT GCGCCTTGGA AGATGTGGGC ATAA
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| Protein sequence | MKAVILAGGL GTRIAEETSS RPKPMVEVGG KPILWHIMKM YSAHGVNDFV ICCGYKGYMI
KEYFANYFLH MSDVTFDMAN NNAMQIHQQY AEPWKITLID TGENTLTGGR LKRVRKYLGD
DDFCFTYGDG VGDVDLTRLI AFHKTHGKQA TVTAVQPPGR FGALDMKGAA VESFVEKPHG
DGMYINGGFF VLSPKVIDLI EDDSTIWERK PLEALAKSNQ LQAFTHNGFW QPMDTLRDKQ
YLEELWAGGS APWKMWA
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