Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0318 |
Symbol | |
ID | 6184005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 285925 |
End bp | 286410 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641671026 |
Product | protein of unknown function DUF520 |
Protein accession | YP_001797225 |
Protein GI | 171463112 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCATCAT TTGACGTTGT ATGTGAGCCA GACATGATTG AGCTCAAAAA TGCTATTGAA CAATCCAATA AAGAAATTAC TAACCGTTTT GATTTCAAGG GCTCTGATAG TCGTGTAGAG CAAAAAGACG AGGCATTGAT TTTGTTTGGC GATGATGACT TTAAGTTGGG TCAAGTGCGC GATGTATTAA TTAACAAAAT GGCCAAGCGT AATGTGGATG TGCGTTATCT CAAGGATGAC AAAACAGAAA CCATTAGTGG AGATAAGCGC AAACAAACCA TGAAAATCCA AAAAGGAATC ACTTCAGAGT TGGCTAAAAA AGTAGTGCGC ATTATTAAAG ACAGTAAGAT CAAAGTACAA GCCAGCATTC AGGGTGATGC GGTGCGCGTC ACTGGTGGTA AGCGTGATGA TTTGCAAGAG ACTATGGCTT TGCTCAAAAA AGAAGTAACT GAAGCGCCAT TGGGCTTTAA TAATTTCCGT GACTAA
|
Protein sequence | MPSFDVVCEP DMIELKNAIE QSNKEITNRF DFKGSDSRVE QKDEALILFG DDDFKLGQVR DVLINKMAKR NVDVRYLKDD KTETISGDKR KQTMKIQKGI TSELAKKVVR IIKDSKIKVQ ASIQGDAVRV TGGKRDDLQE TMALLKKEVT EAPLGFNNFR D
|
| |