Gene Pnec_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0318 
Symbol 
ID6184005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp285925 
End bp286410 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content40% 
IMG OID641671026 
Productprotein of unknown function DUF520 
Protein accessionYP_001797225 
Protein GI171463112 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCAT TTGACGTTGT ATGTGAGCCA GACATGATTG AGCTCAAAAA TGCTATTGAA 
CAATCCAATA AAGAAATTAC TAACCGTTTT GATTTCAAGG GCTCTGATAG TCGTGTAGAG
CAAAAAGACG AGGCATTGAT TTTGTTTGGC GATGATGACT TTAAGTTGGG TCAAGTGCGC
GATGTATTAA TTAACAAAAT GGCCAAGCGT AATGTGGATG TGCGTTATCT CAAGGATGAC
AAAACAGAAA CCATTAGTGG AGATAAGCGC AAACAAACCA TGAAAATCCA AAAAGGAATC
ACTTCAGAGT TGGCTAAAAA AGTAGTGCGC ATTATTAAAG ACAGTAAGAT CAAAGTACAA
GCCAGCATTC AGGGTGATGC GGTGCGCGTC ACTGGTGGTA AGCGTGATGA TTTGCAAGAG
ACTATGGCTT TGCTCAAAAA AGAAGTAACT GAAGCGCCAT TGGGCTTTAA TAATTTCCGT
GACTAA
 
Protein sequence
MPSFDVVCEP DMIELKNAIE QSNKEITNRF DFKGSDSRVE QKDEALILFG DDDFKLGQVR 
DVLINKMAKR NVDVRYLKDD KTETISGDKR KQTMKIQKGI TSELAKKVVR IIKDSKIKVQ
ASIQGDAVRV TGGKRDDLQE TMALLKKEVT EAPLGFNNFR D