Gene Pnec_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0311 
Symbol 
ID6183066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp279156 
End bp279335 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content43% 
IMG OID641671019 
Productprotein of unknown function DUF343 
Protein accessionYP_001797218 
Protein GI171463105 
COG category[S] Function unknown 
COG ID[COG2835] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAC GACTACTCGA TATTTTGGTA TGCCCTTTGT GCAAAAGCCA ACTGCATTTA 
GATGCAAATA AACAGGAATT AATTTGCAAA GCAGATCGTT TGGCCTACCC TATCCGAGAT
GATGTTCCAG TCACGCTGGT AGACGAAGCA CGCAGCCTCA GCGCTGATGA AATTGCATAA
 
Protein sequence
MDKRLLDILV CPLCKSQLHL DANKQELICK ADRLAYPIRD DVPVTLVDEA RSLSADEIA