| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0299 |
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| Symbol | |
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| ID | 6184377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 269672 |
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| End bp | 270286 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671007 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_001797206 |
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| Protein GI | 171463093 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.931154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACAG GAATCATTAC CGCTATCGGT CAAATCAAAA GTGCCCAGGC CAGGGGCGAT
GGTCTTCATC TCCTTGTGGA AGTGCCAGAA GGTTACTTGG ATGATGTCGC TTTGGGTGAT
AGCATTGCCA TTCAGGGTGC ATGTATGACT GCCACCCAGT TAACTGACAA TTCTTTTGCT
TTAGATATTT CTCGTGAATC ACTGAATAAA ACGGTTGGCC TGGATAAAGT CGGTCCGGTT
AATCTTGAGA AGGCAATGCG TCTAAACGAT CGCTTGGGCG GACATTTGGT CAGTGGCCAC
GTTGATGGCG TTGGCAAAGT GGCTAACTTT TCTCAAGTAG CTAACGATGC CTATGGCTCT
TGGCTGTTAC GTATTGAGGC GCCAAAAGAA TTGGCTCAGT ACTTGGCGTA TAAAGGCTCT
ATCGTTGTGA ATGGCGTATC GCTCACAGTG AATAAAACTG AAGATACTGC AGATATCTGC
ATTATTGATA TCAATATCAT CCCTCACACC TTAGAAAACA CTACTCTAGG AAAGCTTGTG
CAAGGCGATG CAGTGAATCT TGAGGTAGAT TTGATTGCGC GCTACGTTGC TCGTATGCTT
AATAAAGGAG TTTGA
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| Protein sequence | MFTGIITAIG QIKSAQARGD GLHLLVEVPE GYLDDVALGD SIAIQGACMT ATQLTDNSFA
LDISRESLNK TVGLDKVGPV NLEKAMRLND RLGGHLVSGH VDGVGKVANF SQVANDAYGS
WLLRIEAPKE LAQYLAYKGS IVVNGVSLTV NKTEDTADIC IIDINIIPHT LENTTLGKLV
QGDAVNLEVD LIARYVARML NKGV
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