| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0289 |
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| Symbol | |
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| ID | 6184331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 262856 |
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| End bp | 264328 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641670997 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_001797196 |
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| Protein GI | 171463083 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 92 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAG TAGATATTCG CACCCAACTA AAAGACTCCA GCCTTTTTAA AGAGACGGCA
TTGATCGACG GTCAATGGCA TGCCTCTAAA AAGACTTTTG TGGTTACCAA CCCCACCACC
GATGAAATCA TTGCTAATGT TGCCAACCTC GAAACGCAAG ATGCAGAGTT AGCCATTGCT
GCGGCAGAAA AAGCCCTGCC AATTTGGCGC AGCAAATTAG CAAAGGAACG CGCGCAAATC
ATGCGCAGAT GGTTTGACCT GATTATTAAA AACACCCAAG ATTTAGCAAA GCTAATGACT
CTCGAGCAAG GCAAACCTTT AGCTGAAGCT GCTGGTGAAG TGGTTTATGG CGCTTCTTTT
GTTGAGTGGT TTGCCGAAGA AGCGAAACGG GTAGAAGGTT CAATCCTCGG CACTACTTGG
AGCGATAAGC GCTTGATGGT GCTAAAGCAA GCAATCGGTG TTTGCGTAGC AATCACTCCG
TGGAATTTTC CGATCGCCAT GATTACCCGC AAAACTGCAC CAGCATTAGC AGCGGGCTGC
ACCATTGTGA TTAAGCCCGC CGAACTCACG CCTTTATCAG CATTAGCGAT TGCTGAACTT
GGTAAGCGTG CCGGCATTCC GGATGGAGTT ATTAATATCG TGACCGCTGA TGCAAATCAA
TCCATTGCTA TTGGCAAGAC TCTCTGCGCA TCACCTACCA TTCGTCACTT CTCCTTTACG
GGCTCGACTG AAGTCGGTCG CATTCTGATG GAACAATGCG CTCCCACCGT TAAGAAGCTA
GCTCTTGAAC TGGGCGGCCA TGCTCCGTTT ATCGTTTTTG AAGATGCCGA CATTGATGCA
GCAGTCAGTG GTGCTATGGC TTCGAAATTC AGAAACTCGG GTCAAACCTG CGTTTGCGCA
AATCGCTTTT ATGTTCATAA AAAAGTACAA GATGCTTTTG TGGAAAAGTT TGCTAAAGCC
CTTGCCATCA TTAAAGTCGG CAATGGCATG GAAGCCGGCA TCACACAAGG CCCCTTGATT
GAAACGGCTG CGCTAGAAAA AGTGAAGAAG CATGTTGCCG ATGCCCTTAG TAAAGGCGCC
AAACTCATTA CTGGCGGCAA GCAGACAATG GAAGGTAAGA ACTTTTACGA GCCTACTATT
TTGGTCAACG TCACCAGCCA GATGCTCATC ACCCACGAGG AAACCTTTGG CCCCGTAGCC
CCAATCATTC CTTTTGAAAG CGATGAAGAG GTGGTCCAGC TAGCAAATAG CAGCCAATTT
GGTCTGGCAT CCTACTTCTA TAGTCGCGAT ATCGGCCGCG TATGGAAAGT AGCTGAAGCT
TTGGAGTACG GCATGGTGGG CGTCAATACC GGCCTCATCT CCAATGAGGT TGCGCCTTTT
GGTGGCGTCA AGCAATCAGG CTTAGGTCGT GAAGGTAGCG TCTTTGGTAT AGATGAATAC
CTGGAAATGA AATACGTCTG TGTGGGCTTG TAA
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| Protein sequence | MQKVDIRTQL KDSSLFKETA LIDGQWHASK KTFVVTNPTT DEIIANVANL ETQDAELAIA
AAEKALPIWR SKLAKERAQI MRRWFDLIIK NTQDLAKLMT LEQGKPLAEA AGEVVYGASF
VEWFAEEAKR VEGSILGTTW SDKRLMVLKQ AIGVCVAITP WNFPIAMITR KTAPALAAGC
TIVIKPAELT PLSALAIAEL GKRAGIPDGV INIVTADANQ SIAIGKTLCA SPTIRHFSFT
GSTEVGRILM EQCAPTVKKL ALELGGHAPF IVFEDADIDA AVSGAMASKF RNSGQTCVCA
NRFYVHKKVQ DAFVEKFAKA LAIIKVGNGM EAGITQGPLI ETAALEKVKK HVADALSKGA
KLITGGKQTM EGKNFYEPTI LVNVTSQMLI THEETFGPVA PIIPFESDEE VVQLANSSQF
GLASYFYSRD IGRVWKVAEA LEYGMVGVNT GLISNEVAPF GGVKQSGLGR EGSVFGIDEY
LEMKYVCVGL
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