| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0278 |
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| Symbol | |
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| ID | 6184420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 254564 |
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| End bp | 255517 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641670988 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001797187 |
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| Protein GI | 171463074 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.572641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 96 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATGTTT TAGTTTTCGG AAAAGATGGC CAACTGGGTA AAGCATTTTC TGCTTTAATT
GGGCAGTCTT CTATTTCCGC AAACACGCAG ATAACTTACC TTGGTAGGGC TGAGTGTGAT
CTTAGTAAAG AGGCTGACGT TTTTGCGGCA CTCAAAGCAG CAAAACCTAA TCTGATTATT
AATGCCTCTG CTTATACGGC AGTGGACAAA GCAGAAACTG AAGTTGATTT GGCTTTCGCA
GTCAATGCAA AGGCTCCGGA AATCATGGCA CGCTATGCCG CAGAAAATGA TGCCACCTTA
TTGCACTACT CAACGGACTA TGTATTTGAT GGCAGTAAAG ATGGTCTTTA TATGGAGGAT
GATCCTCGCA ACCCATTGGG TGTTTACGGC AAAAGTAAGG CTGCTGGTGA GGAAGCAATT
GAAAAGGTAT TTGCAAATTC ATCCAAAGGT CAATTTGCTA TTTTTAGAAC CAGTTGGGTT
TATGGTGATG GCGGTAATTT CATTCGCACA ATGTTGCGCT TGGCAAAAGA CCGTGAAGAA
TTAAAAGTCA TCCATGACCA ACATGGTGTG CCCACTAGCG CGGAGTGGCT TGCTCAGATC
AGTTTGGACT TGGTGTTAGA TCAACAAGGT GGCCTAAAAG TGTTTCCATC GGGTATTTAT
CATGCTATAC CAGCGGGTGA GACTACTTGG CATGGCTTAG CCTCTTTTGC GGTTCAGGTG
GCTCTCAATG CTGGTATTGA GCTCAAGGCA AAGCCTGCAG CTATCAAGCC TATTCTGGCG
GTGAAATACC CACTTCCAGC CCCCAGGCCA ATGAATTCTC GTATGGACCG CTCCAAACTC
CGCAAGACGT TGGAAAACCA GGGCAGCATG GCAAAATTAG GCTCAATTGA TGAGCCGTGG
TCCATTGCTG TGCAGGACTA TATTCAAGCA TTGGCAAAAG ATGGGCTTAT ATAA
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| Protein sequence | MNVLVFGKDG QLGKAFSALI GQSSISANTQ ITYLGRAECD LSKEADVFAA LKAAKPNLII
NASAYTAVDK AETEVDLAFA VNAKAPEIMA RYAAENDATL LHYSTDYVFD GSKDGLYMED
DPRNPLGVYG KSKAAGEEAI EKVFANSSKG QFAIFRTSWV YGDGGNFIRT MLRLAKDREE
LKVIHDQHGV PTSAEWLAQI SLDLVLDQQG GLKVFPSGIY HAIPAGETTW HGLASFAVQV
ALNAGIELKA KPAAIKPILA VKYPLPAPRP MNSRMDRSKL RKTLENQGSM AKLGSIDEPW
SIAVQDYIQA LAKDGLI
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