Gene Pnec_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0276 
Symbol 
ID6184365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp252897 
End bp253370 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content41% 
IMG OID641670986 
Producthypothetical protein 
Protein accessionYP_001797185 
Protein GI171463072 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.577966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAA TCGTTCTTTT CCGAATCAGC AGTAAAGGCT ATCCCAAGGT CAAGGTCGAT 
GGCGTTAACA AATATGACTC GCTCAAAAAT CTAACCGAGA CATTTCAAGG TTGGAAATTT 
ATTTGCGTTG CTGACAACTG TGATGAGGCA TTAATTGAGC ATCTAAAAAC CAATTATCAG 
TTTAATCAAC TGATTAAAAT AAAATTAGGC AATCCTGGCT CATTCTGGAA GCTGTATGAG 
ATCGCTCTGG GCATGGCAAA AGATGACGAC ATCTTCTACT TTATTGAAGA TGATTACCTT 
CACCTTCCAG AGGCACCAAG CGCGCTAGAG GAAGGTTTAC ATTATTTTGA CTATGTCACC 
CTCTACGATC ATCCGGATAA ATACAAATTC CATCATGGTC CCATCAACCC ATACGCTAAA 
CGCAATCGGT ACTCAAAAAC AACCGAAGTT GTAGCTGCCC CCACTCAATG GTAG
 
Protein sequence
MHKIVLFRIS SKGYPKVKVD GVNKYDSLKN LTETFQGWKF ICVADNCDEA LIEHLKTNYQ 
FNQLIKIKLG NPGSFWKLYE IALGMAKDDD IFYFIEDDYL HLPEAPSALE EGLHYFDYVT 
LYDHPDKYKF HHGPINPYAK RNRYSKTTEV VAAPTQW