Gene Pnec_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0260 
Symbol 
ID6184197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp239803 
End bp239973 
Gene Length171 bp 
Protein Length56 aa 
Translation table11 
GC content45% 
IMG OID641670970 
ProductRubredoxin-type Fe(Cys)4 protein 
Protein accessionYP_001797169 
Protein GI171463056 
COG category[C] Energy production and conversion 
COG ID[COG1773] Rubredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTA AAACGTATAT GTGTTTGATC TGCGGCTGGG TCTATGACGA AGCTGCTGGT 
TTGCCGGATG AAGGTATTGC ACCAGGAACG CTTTGGCAAG ATGTGCCAAT GAATTGGACT
TGCCCAGAGT GTGGCGCTCG CAAAGAAGAT TTTGAAATGA TGGCAATTTA A
 
Protein sequence
MEFKTYMCLI CGWVYDEAAG LPDEGIAPGT LWQDVPMNWT CPECGARKED FEMMAI