| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0256 |
|---|
| Symbol | |
|---|
| ID | 6184409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 235358 |
|---|
| End bp | 236419 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641670966 |
|---|
| Product | DNA polymerase III, delta subunit |
|---|
| Protein accession | YP_001797165 |
|---|
| Protein GI | 171463052 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1466] DNA polymerase III, delta subunit |
|---|
| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 94 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAAG TCGATGCCCT GCAAGCACAC CTCAAGTCCC TGAGTGCTGG TGGATCCATG
TTGCCACTGT ATGTTTTTAG TGGTGATGAG CCTTTGTTGA TGATGGAGGC CATGGACCAA
TTGAGGGCTG CGGCCAAAAA GCAAAACTTT ACTGAGCGTG AGGTATTGCT GCAAGAGCGC
GGCTTTGATT GGAGTACTTT ATTAAGTGCT GGTCAGACAA TGTCTTTGTT TGGGGATAAG
CGTTGGGTAG AACTGCGTAT ACCAACTGGC AAGCCTGGGC GTGATGGTGC CGACACTTTA
AAACAATTTG CTGCTCAAAT TGCTTCGCAG TCAAGTGGCG CCGATGGTCC AGACACAGTG
GTTTGCATTG TGTTGCCTCG CTTGGATGGT AAGACCAAGA CTTCCGCGTG GTTTAGTGCG
CTTGATAATG CCGGTATGGC GATTCAGATT GATTCATTGG ATCGCAGTCA TTTGCCGAAT
TGGATTGCTG GACGACTTAA GCGTCAAGAT CAAGAAGTTG AAGCTGGCCC CGAGGGTCAG
CGCACGCTTG AATTTATTGC TGATCAAGTA GAGGGTAATT TAATTGCTGC TCATCAAGAA
ATTCTGAAGT TGGGTTTGCT TTACCCCGTC GGAAAATTAA GTGAAGAACA AATACGTTCC
TCAATTTTGA AGGTGGCACG TTACAACGTT TTCGAATTAA CGGAAGCTAT GCTTGCTGGC
GATCTCGCTA GGCTTAATCG TATGTTAGAT GGCCTTAAAG GTGAAGGTGA GCCGCTAGTA
TTGATTCTGT GGAGCGTAAC CGAAGAGCTT CGGATACTAT CTAAACTAAA GGCGGCAAGT
GATGCTGGGG AGTCTGTGCA AAATCTCATG CGTGCTAATC GGATTTGGGG CAATAAAGAG
CGTTTATATC CAGCGGCGTT GAGAAGGGTT CAGCCACTCA AACTCCGCAG AGCGATGCAA
GTGGCCGCAG GGTTGGATCG CCAGGTAAAA GGTTTGCATG CTGCAGAGTT GCCAGCAGAC
CCTTGGGATG GTCTGCGTTT AGTTGGCAAT TTACTGCGTT AA
|
|---|
| Protein sequence | MVKVDALQAH LKSLSAGGSM LPLYVFSGDE PLLMMEAMDQ LRAAAKKQNF TEREVLLQER
GFDWSTLLSA GQTMSLFGDK RWVELRIPTG KPGRDGADTL KQFAAQIASQ SSGADGPDTV
VCIVLPRLDG KTKTSAWFSA LDNAGMAIQI DSLDRSHLPN WIAGRLKRQD QEVEAGPEGQ
RTLEFIADQV EGNLIAAHQE ILKLGLLYPV GKLSEEQIRS SILKVARYNV FELTEAMLAG
DLARLNRMLD GLKGEGEPLV LILWSVTEEL RILSKLKAAS DAGESVQNLM RANRIWGNKE
RLYPAALRRV QPLKLRRAMQ VAAGLDRQVK GLHAAELPAD PWDGLRLVGN LLR
|
|---|
| |