Gene Pnec_0251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0251 
Symbol 
ID6184494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp229989 
End bp230492 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content48% 
IMG OID641670961 
Productferric uptake regulator, Fur family 
Protein accessionYP_001797160 
Protein GI171463047 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC GTATCATTAA GACATTGATT TTAGCTCCCA ATGCCATAAA TATGACCCAA 
ATCCCTACCC CTGAAGATTT ACGCGATATC GGCCTAAAAG CGACCGGGCC GCGAATGAAA
ATTCTGGATT TTTTCCATCA AAACGGTGGC ACCCACTTTA GCGCGGAAGA TGTCTTTATG
GCTTTGGCCA AAGAAGACAA AGAGATTGGT CTGGCAACCG TTTATCGGGT ACTTACCCAA
TTTGAGCGGG CTGGCCTGCT CCTACGCAGC CATTTTGAAT CCAGCAAGGG CGATAGCAGG
GCTATTTACG AGCTAAACGA GGGTCAGCAT CACGACCACT TGGTCTGCAT CGATTGCGGT
TATGTGGAGG AGTTTGTTGA CGAGGCCATT GAAAAGCGGC AGCGCGATAT TGCTAAAAAC
CTCGGTTTTA AGCTCCAGGA GCATGCCCTA GCGTTGTATG GCCACTGCCA AAAGAAAAAT
TGCCGCAACA AACAGGTTAA ATGA
 
Protein sequence
MADRIIKTLI LAPNAINMTQ IPTPEDLRDI GLKATGPRMK ILDFFHQNGG THFSAEDVFM 
ALAKEDKEIG LATVYRVLTQ FERAGLLLRS HFESSKGDSR AIYELNEGQH HDHLVCIDCG
YVEEFVDEAI EKRQRDIAKN LGFKLQEHAL ALYGHCQKKN CRNKQVK