| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0248 |
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| Symbol | |
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| ID | 6184374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 225996 |
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| End bp | 226757 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641670958 |
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| Product | protein of unknown function DUF558 |
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| Protein accession | YP_001797157 |
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| Protein GI | 171463044 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCAAT TTTATCTTCC CGGGCCATGG GAATCCCAAA AGCCAACTAC CCTCACACCC
GAGGTTGCCC ACCACCTGCG CGTAAGACGC ATCCAAATCG GGGAATTTTT CCCCGTATTT
GACGGAAAAG GCCAAATTGC CAAGGGAGAA CTCCTCTCTT TGGGCGGAAA AACAGGTCAA
GTTCAGCTAA CCAATATCCG CACCGATACC CACCGCGAGA CTCCATACGC GATTACTTTG
GCCCAGGGGC TAGCTGGCGG CGACAAAATG GACTGGATTG TTGAAAAAGC GGTCGAGACT
GGGGCGCAAA ATATTGCTCC AATGCAATGC GAGCGCTCTA TTCTTAAACT CACTCGCTCA
AGCGATGCTG AACGCACCCA AAAACGACTC GCTCACTGGG AAGGGATCAT TCAAGCAGCT
TGCGAACAAT GCGACCGTAC TGTCTTTGCT AGCCTTGAGC CTATTCAAAC ATTTGAAAGC
TACTTAAAAG CAGCGCCAAA ACCTGCCCTA AAGTTGCTAC TCAGCCCTGA CGCAAGCAAA
AGCATGTATT CCGTACTGAT AGAAAACAAA CCTCAAGACA TCGTTCTGAT GATCGGTCCA
GAAGGTGGTC ACTCGCCTGA AGAGGAGGCT CAGGCAGAAG CTGCCGGCTA TCAACTTGTC
TCCTTGGGTG AGCGGGTACT CCGCACTGAA ACAGCTGGTG TGGTAGCCAT TACAGCCGTG
CATAGCGTAT GGAACCCCGA AACGCAAAAT CGCCTCAAGT AG
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| Protein sequence | MPQFYLPGPW ESQKPTTLTP EVAHHLRVRR IQIGEFFPVF DGKGQIAKGE LLSLGGKTGQ
VQLTNIRTDT HRETPYAITL AQGLAGGDKM DWIVEKAVET GAQNIAPMQC ERSILKLTRS
SDAERTQKRL AHWEGIIQAA CEQCDRTVFA SLEPIQTFES YLKAAPKPAL KLLLSPDASK
SMYSVLIENK PQDIVLMIGP EGGHSPEEEA QAEAAGYQLV SLGERVLRTE TAGVVAITAV
HSVWNPETQN RLK
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