Gene Pnec_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0244 
Symbol 
ID6184468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp221524 
End bp222081 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content49% 
IMG OID641670956 
Productphosphatidylglycerophosphatase A 
Protein accessionYP_001797155 
Protein GI171463042 
COG category[I] Lipid transport and metabolism 
COG ID[COG1267] Phosphatidylglycerophosphatase A and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATA CCCCCAATTC TGCAGAAGTG AAGCCAACGC TTAAGTGGGT ATTTCAAACT 
GCCAGCCGCA CGATAGCCTT TGGCTTTGGC AGTGGCCTAA GCCCTATAGC ACCCGGAACC
GTGGGCACGC TCTGGGCCTG GGCAGCCTTT CTTTTTGGGG AATACCTGCT CAGCACGGAG
GACTTTTTCT GGATTATTGG CGGCGGTATA TTGCTTGGCT GCTGGATCTG CGGTCAGGTC
AGCGAGGAGC TAGGCAAAAA AGATTTTGGT GGAATTGTTT GGGATGAAAT CGTTGCCTTT
TGGCTAGCTC TCATCATTAT GCCGACCAAT ATTTGGATGC AGGCTCTTGC ATTCGCACTA
TTCCGCTTTT TTGATGCGGC TAAACCAGGC CCCATTGGCA TGATTGATCG TCACTTTAAA
AATACCGCAA GTGATGGCGC CCAACGCTCC TCTTTTGTGC AAATTCTTTG GCGTGGATTT
GGCATTGTGG TTGATGATCT TGCGGCAGCC TTTTGCACAC TGCTTGTCAT CGCTTTGGTT
CAGTTCTTCA TTCAATGA
 
Protein sequence
MNNTPNSAEV KPTLKWVFQT ASRTIAFGFG SGLSPIAPGT VGTLWAWAAF LFGEYLLSTE 
DFFWIIGGGI LLGCWICGQV SEELGKKDFG GIVWDEIVAF WLALIIMPTN IWMQALAFAL
FRFFDAAKPG PIGMIDRHFK NTASDGAQRS SFVQILWRGF GIVVDDLAAA FCTLLVIALV
QFFIQ