| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0240 |
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| Symbol | pyrF |
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| ID | 6184383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 219163 |
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| End bp | 220008 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641670952 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001797151 |
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| Protein GI | 171463038 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCTC GCTCAAATAC CTTTAACCAG CAACTCCAGT CCGCATGGGC TTCGCAAGGC
AGCATGCTGT GCGTTGGTTT TGACCCAGAC CCAAAGCGCT TACCCCCATA CCTACAAGGG
AAACCAGAGG ACATCTACGA GTTCTGCCGC GAGATTGCTG ATGCCACTGC AGATTTGGTC
TGTGCCTTCA AGCCCCAGCT TGCCTACTTT GCCTCTCAAA GAGCCGAGGC TCAATTAGAA
AAACTCATTG GGCACCTTAA AGACAAATAC CCCCATATTC CCGTGATTCT TGATTCCAAA
CGGGGAGACA TTGGCAGCAC GGCTGACCAC TATGCGCTAG AAGCCTTTAA TCGCTATGGT
GCTGATGCGG TAACAGTGAA CCCCTACATG GGCTTTGACA CGATTGAGCC CTACCTCAAG
CATGCCGGCA AAGGGGTGAT TGTTTTATGC CGCACCTCCA ATCCCGGTGG ATCTGATTTG
CAGTTTTTGA ACATCGCCCC TAATGACGAA CCCCTCTACC TACATGTAGC CAAACTCGCT
GCCCAACAGT GGAATTGCTC TGGCCAAATA AGCTTAGTAG TTGGCGCAGC CTTCCCAGAA
GAAATTGCTA AAGTACGCGC CATTGTTGGC GACATGCCTT TATTGATTCC CGGCATCGGC
GCTCAAGGTG GTGATATTAA CGCGGCTGTG AGTGCTGGAA AAATTGTAGG TAAACCTGGA
ACCGGCATGA TGATCAACTC TTCCCGAGCC ATTCTGTATG CCAGCCCTGG AAGTGATTTT
GCAGAAGCAG CCAGAGCTGT TGCTGTGACT ACGCGTGATG CCCTCAGAGC TGCAGCAAAT
AAATAA
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| Protein sequence | MNSRSNTFNQ QLQSAWASQG SMLCVGFDPD PKRLPPYLQG KPEDIYEFCR EIADATADLV
CAFKPQLAYF ASQRAEAQLE KLIGHLKDKY PHIPVILDSK RGDIGSTADH YALEAFNRYG
ADAVTVNPYM GFDTIEPYLK HAGKGVIVLC RTSNPGGSDL QFLNIAPNDE PLYLHVAKLA
AQQWNCSGQI SLVVGAAFPE EIAKVRAIVG DMPLLIPGIG AQGGDINAAV SAGKIVGKPG
TGMMINSSRA ILYASPGSDF AEAARAVAVT TRDALRAAAN K
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