Gene Pnec_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0237 
Symbol 
ID6184458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp216530 
End bp217300 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content48% 
IMG OID641670949 
ProductTonB family protein 
Protein accessionYP_001797148 
Protein GI171463035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGTCC CAATTAAATC TCTTGAGTTT CTGTATCCCG AGAAACTCAG TAAGGCATTG 
CATTACCTTC ATCGCACATG GAGTCGTTAT CCATTTCGTT TTGCGCTGTG CGTTTCCATT
CTGATTCATA TTCTTTTCTT ATCGTTTCGT TGGGGTGCCG GGGAGATTCA AAATCGCAGG
CTCAATACCC CTTTGAGTGT GGTTTTGGTT AACGCTAGCA ATAAAACACC TCCTCAAAAA
GCTAATAAAT TGGCTCAAGC GGATTTACAG GGCGGTGGCA AAACAGAGAA TCAAGACGCA
ACTGTAGTGC ATCGCGCTAG ATTGGGCGCA GAAGCAAGGC TTGAGGTTTT GGAGAAGCAG
CAAAAACAAA TGCTTGCAAA GCTAGATGAG CGGCGCAATC GCTCCGGCGG TCGCAAAAGT
GGCGACGAGC AAAAAATTTC TCCGCAACTC AATTCGTTAG AAGCAGAGCT AGCTAAGCGA
CTCCAGTCTG ATGGCAGAGA GCCCAGACGT AAAGTGCTGA CAGGTGCCAA TACCAAAGCG
GTGAGATTTG CCCATTACTA CGATGCGATG CATGCGATGC GCCAAAAAAT TGAAGCTTAT
GGCAGTGCGT TTTTCCCAAG AGCAAATGGT CGTCCCTTGT ATGGCAGTTT GGTCATTGTG
GTGAGCGTTG ATAACCAGGA AAGAATCACT ACGAACGCAC AAGGCAAGGA CGGACTTTCA
ATTGATCGCA GCTCAGGTAA CCGGAGTTGG ATCGCCAGGC CATTGCCATA G
 
Protein sequence
MLVPIKSLEF LYPEKLSKAL HYLHRTWSRY PFRFALCVSI LIHILFLSFR WGAGEIQNRR 
LNTPLSVVLV NASNKTPPQK ANKLAQADLQ GGGKTENQDA TVVHRARLGA EARLEVLEKQ
QKQMLAKLDE RRNRSGGRKS GDEQKISPQL NSLEAELAKR LQSDGREPRR KVLTGANTKA
VRFAHYYDAM HAMRQKIEAY GSAFFPRANG RPLYGSLVIV VSVDNQERIT TNAQGKDGLS
IDRSSGNRSW IARPLP