Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0225 |
Symbol | |
ID | 6184472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 206586 |
End bp | 207545 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641670937 |
Product | PfkB domain protein |
Protein accession | YP_001797136 |
Protein GI | 171463023 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000145112 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGCT TGATCTGTGG CTCCATCGCC TACGACACCA TCATGAACTT TGAAGGCAAA TTTGCCGATC AAATCCTGCC TGAGCAAATT CATATCCTGA ATGTAGCCTT CTTAGTGCCA ACCATGCGGC GCGAATTTGG TGGCTGCGCA GGCAATATTG CCTACAACCT CAGTCTTTTG GGTGGTGATC CCATCATCAT GGCGACCGTT GGTGGCGATG CAATGCCGTA TATGAATCGC CTTGAGCAAC TCAAGATTGA TGCAAGCCAT ATTCGCCAGA TTGAAAATGC CTTTACGGCA CAAGCCATGA TCACCACCGA TCAGGCAAAC AATCAAATTA CCGCTTTCCA TCCAGGAGCA ATGGGTGAAT CCCACCTCAA TCAGGTTTCT GCAGTTGTGG CGGAGCGCAG TAAAAACGCT AAGGGACCAG CCAAGCTAGG TATTGTTGCC CCTGATGGTC GCCAAGGGAT GTGGGAGCAC TGCCATCAAT TGGCTGACGC AAACATTCCT TTCATCTTCG ATCCAGGCCA AGGTTTGCCT ATGTTCAACG AACCAGAGTT ACTTGAACTG GTCGATATCG CCAGCTACTT AGCCGTTAAT GACTATGAAG GTAAAATGCT TTCGCAGAGA ACGGGCTTGA GTTTGGCAAA AGTCGTCCAG CGAGTTAAAG CATTGATTGT CACGAAAGGG GCTGAAGGGG CTGATATCTA CGTTGATGGT AAATATATTG CCATTCCACC CGTGCCAGCA GCAAAAGTAG TTGATCCAAC CGGTTGCGGC GACGCATTCC GCGGCGGATT ACTCTTTGGA TTAGAAAGTG GCATGGACTG GGAGACCACT GGTCGCCTGG CAAGCCTCAT GGGCTCAATC AAAATTACCC ATCAAGGACC ACAAAATCAC CAATTAAGCA AAGATCAGAT TGCTAGCCAA TTTAAAGCGG CGTTTGGCTT TAGCTTTTAA
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Protein sequence | MASLICGSIA YDTIMNFEGK FADQILPEQI HILNVAFLVP TMRREFGGCA GNIAYNLSLL GGDPIIMATV GGDAMPYMNR LEQLKIDASH IRQIENAFTA QAMITTDQAN NQITAFHPGA MGESHLNQVS AVVAERSKNA KGPAKLGIVA PDGRQGMWEH CHQLADANIP FIFDPGQGLP MFNEPELLEL VDIASYLAVN DYEGKMLSQR TGLSLAKVVQ RVKALIVTKG AEGADIYVDG KYIAIPPVPA AKVVDPTGCG DAFRGGLLFG LESGMDWETT GRLASLMGSI KITHQGPQNH QLSKDQIASQ FKAAFGFSF
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