Gene Pnec_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0225 
Symbol 
ID6184472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp206586 
End bp207545 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content49% 
IMG OID641670937 
ProductPfkB domain protein 
Protein accessionYP_001797136 
Protein GI171463023 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000145112 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGCT TGATCTGTGG CTCCATCGCC TACGACACCA TCATGAACTT TGAAGGCAAA 
TTTGCCGATC AAATCCTGCC TGAGCAAATT CATATCCTGA ATGTAGCCTT CTTAGTGCCA
ACCATGCGGC GCGAATTTGG TGGCTGCGCA GGCAATATTG CCTACAACCT CAGTCTTTTG
GGTGGTGATC CCATCATCAT GGCGACCGTT GGTGGCGATG CAATGCCGTA TATGAATCGC
CTTGAGCAAC TCAAGATTGA TGCAAGCCAT ATTCGCCAGA TTGAAAATGC CTTTACGGCA
CAAGCCATGA TCACCACCGA TCAGGCAAAC AATCAAATTA CCGCTTTCCA TCCAGGAGCA
ATGGGTGAAT CCCACCTCAA TCAGGTTTCT GCAGTTGTGG CGGAGCGCAG TAAAAACGCT
AAGGGACCAG CCAAGCTAGG TATTGTTGCC CCTGATGGTC GCCAAGGGAT GTGGGAGCAC
TGCCATCAAT TGGCTGACGC AAACATTCCT TTCATCTTCG ATCCAGGCCA AGGTTTGCCT
ATGTTCAACG AACCAGAGTT ACTTGAACTG GTCGATATCG CCAGCTACTT AGCCGTTAAT
GACTATGAAG GTAAAATGCT TTCGCAGAGA ACGGGCTTGA GTTTGGCAAA AGTCGTCCAG
CGAGTTAAAG CATTGATTGT CACGAAAGGG GCTGAAGGGG CTGATATCTA CGTTGATGGT
AAATATATTG CCATTCCACC CGTGCCAGCA GCAAAAGTAG TTGATCCAAC CGGTTGCGGC
GACGCATTCC GCGGCGGATT ACTCTTTGGA TTAGAAAGTG GCATGGACTG GGAGACCACT
GGTCGCCTGG CAAGCCTCAT GGGCTCAATC AAAATTACCC ATCAAGGACC ACAAAATCAC
CAATTAAGCA AAGATCAGAT TGCTAGCCAA TTTAAAGCGG CGTTTGGCTT TAGCTTTTAA
 
Protein sequence
MASLICGSIA YDTIMNFEGK FADQILPEQI HILNVAFLVP TMRREFGGCA GNIAYNLSLL 
GGDPIIMATV GGDAMPYMNR LEQLKIDASH IRQIENAFTA QAMITTDQAN NQITAFHPGA
MGESHLNQVS AVVAERSKNA KGPAKLGIVA PDGRQGMWEH CHQLADANIP FIFDPGQGLP
MFNEPELLEL VDIASYLAVN DYEGKMLSQR TGLSLAKVVQ RVKALIVTKG AEGADIYVDG
KYIAIPPVPA AKVVDPTGCG DAFRGGLLFG LESGMDWETT GRLASLMGSI KITHQGPQNH
QLSKDQIASQ FKAAFGFSF