Gene Pnec_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0224 
Symbol 
ID6183881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp206141 
End bp206371 
Gene Length231 bp 
Protein Length76 aa 
Translation table11 
GC content39% 
IMG OID641670936 
Producthypothetical protein 
Protein accessionYP_001797135 
Protein GI171463022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000000000558305 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTG CCAAGAAAAA ACCAGCTGCT AAAAAAGTAG CTGCTAAAAA AGTAGCTAAA 
AAGCGTCCTG CTGCTAAAAA AGTAGCTGCA AAAAAGGTTG CTAAAAAGCG TCCTGCTGCT 
AAAAAAGTAG CTGCAAAAAA GGTTGCTAAA AAGCGTCCTG CTGCTAAGAA GCCTGCTGCT 
AAAAAAGCTG CAAAAAAGGT TGCTAAAAAG CGCGTAGCAA AAAAAAAGTA A
 
Protein sequence
MATAKKKPAA KKVAAKKVAK KRPAAKKVAA KKVAKKRPAA KKVAAKKVAK KRPAAKKPAA 
KKAAKKVAKK RVAKKK