Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0223 |
Symbol | |
ID | 6183301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 204624 |
End bp | 205808 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641670935 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_001797134 |
Protein GI | 171463021 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000260212 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.80957 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAATT GGGATGAGGA AGTTGCTCCA GCACTAGCGA AAGCTGGTCT TGCACCGCAG CCGGTTGCAG TGGAGCCACA ACGTCCACAG CCAGATCAAG CGGCAATGGC ACCGCAAGCT ACAGCGCCTG AACCAGTAGC AACTGCTAAT TTATCTGGTG GCGCATCTTT GCGTGTAAAG GCTGCTGATA AGCGCGTTAT TAATGCCAAG ACTGACGTAA ATCAGTTGGT TCCATTTAAA TACAAATGGG CGTGGGAGAA GTATTTGGCT GGTTGTGCAA ACCACTGGAT GCCACAAGAG ATCAATATGA ACCGCGATAT CGCGCTTTGG AAAGATCCAA ATGGCCTGAC AGAAGATGAG CGCCGCATTA TTAAACGTAA TCTCGGTTTC TTTACAACGG CCGACTCTTT GGCTGCAAAC AATATTGTTT TGGGTACTTA TCGCCATATT ACTGCTCCAG AATGCCGTCA ATATCTATTG CGCCAGGCGT TTGAAGAGGC AATTCATACC CATGCATACC AATATATTGT GGAATCTTTG GGTCTAGACC AGAGCGAAAT CTTCAATGCG TATCACGAGA TTGACTCAAT TCGCGCAAAA GATGAGTTCT TAATTCCTTA TATTGATGTT CTTACCAACC CAAATTTCAA GACTGGCACG CTTGAAGCCG ATCAAACTTT GCTTCGATCA CTGATTGTTT TTGCTTGTGT GATGGAGGGT TTGTTCTTTT ATGTTGGTTT TACGCAAATC CTTGCGATGG GTCGTCAAAA CAAAATGACG GGTGCTGCTG AGCAGTATCA ATACATCCTT CGTGACGAGT CTATGCACTG CAATTTTGGC ATCGATTTGA TTAACCAAAT CAAGCTGGAG AACCCGCAGT TATGGATTTC CGCGTTCAAA GACGAGATCA AATCCATCTT CGAAAAAGCA GTCGAATTAG AGTACCGTTA TGCCGAAGAT ACTATGCCCC GCGGAGTGCT CGGATTGAAC GCTCCGATGT TCAAAGGGTG CCTAAGATAC ATTTGTAATC GCAGATGTTT GCAAATAGGA CTTGACGCGA TGTTCCCAAA TGAAGAGAAT CCATTTCCAT GGATGTCAGA AATGATTGAT CTGAAAAAAG AACGAAACTT TTTTGAGACA CGCGTTATTG AGTATCAAAC CGGTGGTGCG CTTAGTTGGG AGTAG
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Protein sequence | MLNWDEEVAP ALAKAGLAPQ PVAVEPQRPQ PDQAAMAPQA TAPEPVATAN LSGGASLRVK AADKRVINAK TDVNQLVPFK YKWAWEKYLA GCANHWMPQE INMNRDIALW KDPNGLTEDE RRIIKRNLGF FTTADSLAAN NIVLGTYRHI TAPECRQYLL RQAFEEAIHT HAYQYIVESL GLDQSEIFNA YHEIDSIRAK DEFLIPYIDV LTNPNFKTGT LEADQTLLRS LIVFACVMEG LFFYVGFTQI LAMGRQNKMT GAAEQYQYIL RDESMHCNFG IDLINQIKLE NPQLWISAFK DEIKSIFEKA VELEYRYAED TMPRGVLGLN APMFKGCLRY ICNRRCLQIG LDAMFPNEEN PFPWMSEMID LKKERNFFET RVIEYQTGGA LSWE
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