| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0219 |
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| Symbol | |
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| ID | 6184448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 198257 |
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| End bp | 199639 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641670931 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001797130 |
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| Protein GI | 171463017 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.382066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.73779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGAAA ACCTCACCGA CCGCCTATCT CGCGTTGTTA AAACAATGCG GGGCCAAGCC
CGCCTCACCG AGGCCAATAC CGCAAAAATG CTGCGAGAAA TCCGCCTAGC CTTATTAGAG
GCTGACGTAG CGCTTCCTGT AGTGAAGTCT TTGCTTGAGC AAATTAAATT TAAAGCCCTT
GGCGAGGAAG TGGTTGGAAG CCTAAGCCCT GGCCAAGCAC TGGTTGGGGT AGTACAACGT
GAACTCGCCC AAGTAATGCA GAGTGACACA AATCAAAGTG GTGAACTCAA TTTAGCAACC
CAGCCTCCAG CAGTCATTTT GATGGCCGGT TTGCAAGGTG CAGGTAAAAC CACTTCTGTA
GGCAAGCTAG CAAAGTGGCT ACAAGAGAAA AAGAAAAAGA AGGTTCTCAC CGTATCTTGT
GACGTATATC GTCCAGCAGC AATTGAGCAA TTAGAAACGG TCACCAAACA AGTTGGTGCA
GAATTTTTTC CAAGCGACAT CAGCCAAAAA CCAAATGATA TTGCACTAGC GGCCCTTGAC
TGGGCGCGCC ACCACTACTT TGACGTAGTG TTGGTTGATA CCGCAGGTCG TCTTGGTATT
GATGAAGCGC TCATGCAAGA AATTAAAACT TTGCATAGCA GTCTGAACCC TATTGAAACC
TTGTTCGTAG TCGATGCGAT GCTCGGTCAA GATGCCGTCA ATACCGCCAA GGCTTTCCAC
GAGGCATTGC CACTCACTGG CGTCATTCTG ACCAAGCTAG ACGGTGACTC CCGTGGCGGT
GCCGCACTCT CAGTTCGCCA GATTACTGGT GTGCCCCTCA AATTCATCGG CGTAGCTGAA
AAGATGGATG GCCTGGAAGC GTTTGATGCC GAACGTATGG CTAACCGCAT CTTGGGCATG
GGCGATATTC TTGCCTTAGT TGAACAAGCT CAACAACATG TAGACGTTGC TAAAGCAGAA
AAATTAGTCA GCAAGATTTC CAAAGGTGGC TTTGACCTTG AAGACTTCCG TGACCAGCTT
ATGCAAATGC AAAAAATGGG TGGTATGGTC AGCCTAATGG ATAAGTTGCC TAGCCAAGTG
GCGCAAGCTG CTTCGAAAAC TAATTTAAGC AATGCTGATA AGCAAACTAC ACGCATGCGT
GGAATCATTG ACAGTATGAC CCCGCAAGAG CGCAGAAAAC CTGAATTACT AAAAGCTAGT
CGTAAACGTC GTATAGCCGC AGGCTCTGGA GTGGAGGTGC AAGAAGTAAA TCGCCTACTT
GCTCAGTTCG AGCAAATGCA AACCATGATG AAGCAATTTA AGGGCGGGAA AATGGCGCGC
ACCATGGCAA GCATGGCTGC AAAAGGGGCC GCCAAGGGCA TTGGCGGGCT CTTCAAGAAA
TAA
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| Protein sequence | MLENLTDRLS RVVKTMRGQA RLTEANTAKM LREIRLALLE ADVALPVVKS LLEQIKFKAL
GEEVVGSLSP GQALVGVVQR ELAQVMQSDT NQSGELNLAT QPPAVILMAG LQGAGKTTSV
GKLAKWLQEK KKKKVLTVSC DVYRPAAIEQ LETVTKQVGA EFFPSDISQK PNDIALAALD
WARHHYFDVV LVDTAGRLGI DEALMQEIKT LHSSLNPIET LFVVDAMLGQ DAVNTAKAFH
EALPLTGVIL TKLDGDSRGG AALSVRQITG VPLKFIGVAE KMDGLEAFDA ERMANRILGM
GDILALVEQA QQHVDVAKAE KLVSKISKGG FDLEDFRDQL MQMQKMGGMV SLMDKLPSQV
AQAASKTNLS NADKQTTRMR GIIDSMTPQE RRKPELLKAS RKRRIAAGSG VEVQEVNRLL
AQFEQMQTMM KQFKGGKMAR TMASMAAKGA AKGIGGLFKK
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