| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0218 |
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| Symbol | |
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| ID | 6184381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 196495 |
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| End bp | 198237 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641670930 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001797129 |
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| Protein GI | 171463016 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.633447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.230302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAT CACAATCATT TCTCGCCACG CTAAAAGAAG CCCCCTCTGA CGCAGAGGTG
GTTTCGCACA AGCTCATGGT GCGCGCAGGA TTAATTCGTA AGCTAAGCGC GGGCGTCTAT
AACTATTTGC CACTCGGTTT AAAGGTGATT CGCAAGGTGG AAAACATCAT TCGCGAAGAA
ATGAACCGTG CTGGCGCCAT CGAGTTACTC ATGCCGATGA TTCAGCCTGC CGAATTATGG
CAAGAGACTG GTCGTTGGGA AAAGATGGGT CCTGAGTTGC TTCGTATTAA AGATCGCCAT
GACCGTGATT TTTTAATTCA GCCAACCTCT GAAGAGGTGG TGACCGATTT GGCTCGTAAT
GAGATTAAGA GCTACAAGCA GTTACCTGTC AATTTTTATC AGATTCAAAC GAAGTTCCGC
GATGAACGTC GTCCCCGCTT CGGAATCATG CGTGGTCGTG AGTTCAGTAT GAAAGATGCC
TACTCATTTG ATCGCGATAC CGAGGGGCTG AAGAAGTCTT ATCAAATCAT GTTCGACGCA
TACACTCGTA TCTTTAAACG TATGGGCCTT CAGTTCCGTG CGGTAACTGC TGATAACGGT
GCCATTGGGG GCTCAGGCAG TCAAGAGTTC CATGTGATTG CTGATACCGG TGAGGACGCG
ATTGTCTACT GCCCGGATTC TGATTACGCC GCCAATCTTG AGGCTGCTGA ATCATTGGCG
TTAATTGCTT CACGTGCCGC AGCCTCAGTG GCCATGGCTA AGGTGCCTAC ACCCGATAAA
ACGAATTGCG CTGATGTAGC TAAGTTCTTA AACATTCCAA TTGAATCCAC TGTTAAGTCA
TTGCTATTTG TTGCGGATCA AGAAAATGGA CCGGCAAAAC TCTTTATGTT ATTGGTCCGT
GGTGATCACG AACTCAATGA AGTGAAGGCC AGCAAGATTC CTGGAATGGC GGAATCTCGT
TTTGCTTCTG AAGCTGAAAT CAAACTAGCT TGCAATGCTC CTGCGGGCTA CTTGGGCCCT
GTTGGAGTAA GTGCTGATGC TACTGTAGTT GCAGATCGCA CCGTTGCTAA TATGGCAGAT
TTTGTCTGTG GTGCAAATGA TGCTGGTCAT CACTTGACTG GCGTGAACTG GGGCCGTGAT
TTGCCTGAGC CACTTGTATT GGATATTCGT AATGCGGTTG TTGGCGACCC TTCTCCTGAC
GGTAAAGGAG TTGTCGATAT TTGCCGTGGT ATTGAAGTCG GTCACGTATT CCAATTGGGT
ACGCGTTATT CAGAAGCAAT GGGTTGCACT TACCTAGATC AGCAGGGTAA GGCCCAGCCA
ATGGTGATGG GTTGCTATGG CATCGGCGTT ACGCGCTTAC TCGGTGCTGC GATTGAACAA
GGACATGATG AGAAGGGCAT TATCTGGCCA ATCTCGATGG CACCATGTGA GGTAGTTATT
TGCCCTATGG GTTACGAAAA ATCCGAGGCA GTAAAAGCAG CATGCGATCA ATTGCACGAT
GGGCTACTGG CCGCAGGCGT TGATGTCATT CTGGACGATC GCAATGAGCG TCCAGGTGCG
ATGTTTGCTG ACTGGGGGTT GATTGGGGCG CCATTCCGCG TAGTGATTGG TGATCGCGGC
TTAGTAGATT CTCAAGTGGA ATTCAAGGGT CGCACTGATG CTGAATCTCA AAATATTCCG
CTAACCCAAA TCAAAGAAAA AGTGATTGCT GCAATTCAAA CAACAAAACA ATCCATTGTT
TAA
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| Protein sequence | MKASQSFLAT LKEAPSDAEV VSHKLMVRAG LIRKLSAGVY NYLPLGLKVI RKVENIIREE
MNRAGAIELL MPMIQPAELW QETGRWEKMG PELLRIKDRH DRDFLIQPTS EEVVTDLARN
EIKSYKQLPV NFYQIQTKFR DERRPRFGIM RGREFSMKDA YSFDRDTEGL KKSYQIMFDA
YTRIFKRMGL QFRAVTADNG AIGGSGSQEF HVIADTGEDA IVYCPDSDYA ANLEAAESLA
LIASRAAASV AMAKVPTPDK TNCADVAKFL NIPIESTVKS LLFVADQENG PAKLFMLLVR
GDHELNEVKA SKIPGMAESR FASEAEIKLA CNAPAGYLGP VGVSADATVV ADRTVANMAD
FVCGANDAGH HLTGVNWGRD LPEPLVLDIR NAVVGDPSPD GKGVVDICRG IEVGHVFQLG
TRYSEAMGCT YLDQQGKAQP MVMGCYGIGV TRLLGAAIEQ GHDEKGIIWP ISMAPCEVVI
CPMGYEKSEA VKAACDQLHD GLLAAGVDVI LDDRNERPGA MFADWGLIGA PFRVVIGDRG
LVDSQVEFKG RTDAESQNIP LTQIKEKVIA AIQTTKQSIV
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