Gene Pnec_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0204 
Symbol 
ID6182888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp185655 
End bp186167 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content47% 
IMG OID641670921 
Productmethylated-DNA--protein-cysteine methyltransferase 
Protein accessionYP_001797120 
Protein GI171463007 
COG category[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.132884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGT CTCCAAAGCC ATTAATTGCC AATAGCCCTA GCTACTGCGT GATAGCGGCG 
CCTTTCGGCC GTCTTGGAAT TTCAACCGAG TTGGTGGAGG GAGGTTTGAT GTTGTCCAAA
ATTGACTATT TACCATCAGC GGCCACATTA ATAGCTCCAA AGAACGCCTT GGCAAAAGAG
GTTGAGCGCC AATGCAGGGC TTATTTCAAA GACCCCAATT GGCAATTTGA TTTGCCTACT
AAATCAGCTG GTACTGAGCA CCAGAAAAAA GTATGGGCTA GCATTCAAGA TATACCCGCT
GGCAAAACTC AGGCCTATGG TGAAGTGGCC AAGAAAATCA AGAGTGGTCC GCGGGCGGTA
GGTACTGCTT GTGGCGCAAA TCCTTACCCC CTAATTACTC CATGTCATAG GGTAGTTTCG
GCTCAAGGGG TTGGGGGATT CATGAAAGAA AACTCCCCTG GTTTTTATCG CCAAATTAAG
CTCTGGCTTT TAAAGCATGA AGGTGCTTTG TAA
 
Protein sequence
MTASPKPLIA NSPSYCVIAA PFGRLGISTE LVEGGLMLSK IDYLPSAATL IAPKNALAKE 
VERQCRAYFK DPNWQFDLPT KSAGTEHQKK VWASIQDIPA GKTQAYGEVA KKIKSGPRAV
GTACGANPYP LITPCHRVVS AQGVGGFMKE NSPGFYRQIK LWLLKHEGAL