Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0203 |
Symbol | |
ID | 6184387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 184247 |
End bp | 185536 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641670920 |
Product | protein of unknown function DUF21 |
Protein accession | YP_001797119 |
Protein GI | 171463006 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 0.228231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCT TTTTTGACGA TTGGCCGTTT TATGGTCAAG TTGCTCTAGT CCTATTTTTA CTTGCACTAT CCGGCTTTTT CTCGATGGCA GAAACCAGCA TGCTGTCCTC CAACCGTCAT CGTCTCCGCG CAATGGCCAA TGGTGGCAAT GCAGGTGCAG CCCTAGCCGA AAGACTCTTA AAACGCATAG ATTCATTGCT ATCAGTACTG CTGATTTCCA ACAACCTAAT TAATACTGTT TTACCGATCC TAGTAACGGG TATTGCTCTG CATATTTTTG GAGATAGCGG TCTCGTACTC TCCATCGCCA CTTTAGTGGT TGCTCTGCTG ATTATTATTT TTAGCGAAAT TACCCCGAAA GTTATTGGCG CGGCATTTCC AGAAAGAATC GCATCCAATG TTGGCTGGCT TATCCTGCCA CTCACGTTTT TACTAGCCCC TTTACTCTGG TTTATTAATA GCTTTGTCTC TGGATTAATG AAAATATCCG GCTTGCAGTC GTCCTCTGAC AGTAGAGCCA TGAGCAAGGA GGAGTTACGC AGTCTCGTAT TGGAATCAAA TCGTTTTGTT TCCACTCACC ATCGCAATAT TCTGCTCAAC TTGTTTAACC TCGAAAACAT CGCCGTTGAT GATGTCATAA CCCCCAGATC CAAGATTGAA GTTTTAGATC TATCAAGACC GATTGATGAA GTTGTTCAGC AACTGGAAAC TTGCTATCAC AATAAATTGC CAGTTTGCGA CGAAGACTCT GAACGCATAG TTGGTATCCT CTCAGTCAAA AAAGCCTTGT CCTTGCTGGG CGATACAAAC TTGACGCATG AGGACTTCAG AGCTCTACTC AATGAGCCCT ACTTTATTCC CAGTGGTACA CTCGTACTAC AGCAAATGCA GTTTTTTCAG GACAATCAAC AGCGCTTGAG TTTGGTTGTA AATGAATATG GCGAAGTGTT AGGACTAGTT ACTTTTGAAG ATATCGTTGA AGAGCTAATT GGTGAATTCA CCACCTCGTT CTCAAATCTT TCAACCGACC CCCATTGGCT TGCCGATGGC ACCTATCTTG CAAGTGGTGG CGCCTCACTG AGAGACCTCA ATCGCTTGCT CAGCCTCAAC CTTCCGCTGG ATGGGCCGCG CACATTAAAT GGTCTCATTC TTGAAAGGCT GGAAGCCATC CCAGATCATG ATGTCAGCAT TCGAATTGCT GGCGTCGTCA TGGAAATCGT GCAGTTTGAT GAACATGGCG TGAAAACAGT AAAACTCTAT CGCCCCACCC CAGCTCAAGA GCAAGATTGA
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Protein sequence | MDTFFDDWPF YGQVALVLFL LALSGFFSMA ETSMLSSNRH RLRAMANGGN AGAALAERLL KRIDSLLSVL LISNNLINTV LPILVTGIAL HIFGDSGLVL SIATLVVALL IIIFSEITPK VIGAAFPERI ASNVGWLILP LTFLLAPLLW FINSFVSGLM KISGLQSSSD SRAMSKEELR SLVLESNRFV STHHRNILLN LFNLENIAVD DVITPRSKIE VLDLSRPIDE VVQQLETCYH NKLPVCDEDS ERIVGILSVK KALSLLGDTN LTHEDFRALL NEPYFIPSGT LVLQQMQFFQ DNQQRLSLVV NEYGEVLGLV TFEDIVEELI GEFTTSFSNL STDPHWLADG TYLASGGASL RDLNRLLSLN LPLDGPRTLN GLILERLEAI PDHDVSIRIA GVVMEIVQFD EHGVKTVKLY RPTPAQEQD
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