| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0198 |
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| Symbol | |
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| ID | 6184178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 180319 |
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| End bp | 181071 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641670915 |
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| Product | protein of unknown function DUF1342 |
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| Protein accession | YP_001797114 |
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| Protein GI | 171463001 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.229656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATTGTCT ACGAATACCC CTTTAACGAA TTAGTTCGAA GCATGCTTCG ACTGGAGTAT
TTGTTCACCC GCTTTAATCA TTTTGTCCGG TCAGATGATC CCGAGTTACA CCATAATGCA
ATCTCTATTT TGTTTGATCT TGGTGATATT GGGGCTCGTG GCGATATTAA GTCTTTGCTG
CTCAAAGAAT TTGAGCGCCA AAAATATGCT CTCAATGGAT TGAAGTCTTC ACAAAAAGTA
GATCAAGAAG CGCTTTCACA AACGCTTTCT GAAATTGATG CAGTTACAAC TAGCATTAAT
CAATCCGCCG GTAGACCTAA CTCGGTTATT ACCGAAAGCG AATGGTTAAA CGCAATTCGC
ACTCGCCTAA ATATTCCAGG CGGTACAAGT CCTATTGATT TACCTAGCTA TCACGCCTGG
AAAAATAGTC CAACATCTGA GCGCCGCGAA TTACTTGAAA AATATATTGG CCCACTTTTG
CCTTGGCAAG AAGCCTGTCA ATTATTTTTG CGACTACTAC GACAATCAGA TGAGGCTAAG
GATGTGACTG CTCATAATGG GTCTTTTCAG CAAGCCCCTT CTGGCAAGGT TTATCAATTG
ATACGCATTG CTGTTGAAGA TGACTCTTTA TTTTCTGAGA TAAGCGCTAA CAAATATTTA
CTCTCAGTAC GTTTCTTAAA GTCAGAACGC GATAAAAAAG CACAGCTGGT AAATGCAGAC
GTGCCATTCA AGCTAACCCT CTGCCAGCTT TAA
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| Protein sequence | MIVYEYPFNE LVRSMLRLEY LFTRFNHFVR SDDPELHHNA ISILFDLGDI GARGDIKSLL
LKEFERQKYA LNGLKSSQKV DQEALSQTLS EIDAVTTSIN QSAGRPNSVI TESEWLNAIR
TRLNIPGGTS PIDLPSYHAW KNSPTSERRE LLEKYIGPLL PWQEACQLFL RLLRQSDEAK
DVTAHNGSFQ QAPSGKVYQL IRIAVEDDSL FSEISANKYL LSVRFLKSER DKKAQLVNAD
VPFKLTLCQL
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