Gene Pnec_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0180 
Symbol 
ID6184195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp160748 
End bp162019 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content45% 
IMG OID641670900 
Productcell division protein FtsW 
Protein accessionYP_001797099 
Protein GI171462986 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02614] cell division protein FtsW 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.598529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAA AAGAGAAACT CTTTCCTGAA AATCGACTGG GACTAAACCG ATTCTGGAAT 
TTTTCCAGGG GTGGAATTGA TAACTTCCGT ACCGGCTTAA GAGATGCAGT ATCTGGTGTA
GAGCAAACTC GATCACGCAT GATGGAATAT GACCAGTTGC TTGTGTGGGC AATTTTGTCT
CTTATGTTGA TTGGTCTGGT AATGGTGTAT TCAGCTTCAA TTACTTTGGC AGATGGGCCA
AAGTATGCGA ACTACAGCAG CAACTTTTTC TTAATTCGCC ACATGATCTC TCTGGCGATT
GCAATTGGAG TAGGCATTTG GGCTTTCAAA ATCCCTACCA AGGTTTGGGA TCGCTACTCA
CCAGTAATTT TTGGAATCAC AGTTCTGTTA CTTATCGCAG TATTAATTCC TGGTGTAGGT
AGGGGTGTTA ATGGTGCAAA GCGCTGGATT CCTTTAGGCC TGATGAACTT TCAGTCTTCC
GAGTTAATGA AATTTGCTGC AGTGATTTTT GCTGCAAGCT ACACCGTCCA ACGCCAAGAA
TATCTTCATT CGTTTGTTAA GGGCATGCTG CCAATGGGTA TCGCAGTTGC TCTGGTGGGT
GGTTTGCTAA TGGCTGAGCC AGACATGGGC GCATTCGTGG TGGTCGCCTT GATTGCCTTT
GGCATTCTCT TCTTGGGCGG CATTAACGCT AAATTATTTG GTGGTTTGAT TGCGGTTGGC
TTGATGAGTG GTGCAACGAT GATTGCCTTT TCACCATTAC GTCGTGGACG CATGTTGGCG
TTCATGGATC CATGGCAAGT AGATAATGCA GCCAATAAAG GATATCAGTT AACACATTCA
CTCATGGCAT TTGGACGTGG CGAATGGTTT GGTACAGGCC TTGGCGGTAG CGTAGAGAAA
TTACATTACT TGCCTGAAGC ACATACCGAT TTCATCATGG CAGTGATTGG TGAAGAATTG
GGATTCGTAG GTGTGGTTGT TATGATCTTC TTGTTCTATT GGATCGTACG TCGCGCATTC
TTAATTGGCC GCACTGCTTT GCAACTGGAT CGCAGTTTTG CTGGTCTCGC TGCTAAAGGT
GTAGCGATCT GGATTGGTTG GCAGGCTTTT ATTAATATGG GTGTGAACCT TGGGCTTCTA
CCAACCAAAG GCTTAACTTT GCCGTTGGTA AGTTATGGCG GTTCTGGCAT TTTGATGAAC
GCTGTTGCGA TGGCAATGCT ATTGCGTATT GATTTTGAAA ATCGCATTCT GATGCGTGGA
GGGAAGTTGT GA
 
Protein sequence
MNLKEKLFPE NRLGLNRFWN FSRGGIDNFR TGLRDAVSGV EQTRSRMMEY DQLLVWAILS 
LMLIGLVMVY SASITLADGP KYANYSSNFF LIRHMISLAI AIGVGIWAFK IPTKVWDRYS
PVIFGITVLL LIAVLIPGVG RGVNGAKRWI PLGLMNFQSS ELMKFAAVIF AASYTVQRQE
YLHSFVKGML PMGIAVALVG GLLMAEPDMG AFVVVALIAF GILFLGGINA KLFGGLIAVG
LMSGATMIAF SPLRRGRMLA FMDPWQVDNA ANKGYQLTHS LMAFGRGEWF GTGLGGSVEK
LHYLPEAHTD FIMAVIGEEL GFVGVVVMIF LFYWIVRRAF LIGRTALQLD RSFAGLAAKG
VAIWIGWQAF INMGVNLGLL PTKGLTLPLV SYGGSGILMN AVAMAMLLRI DFENRILMRG
GKL