| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0176 |
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| Symbol | |
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| ID | 6182992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 154957 |
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| End bp | 156507 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670896 |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
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| Protein accession | YP_001797095 |
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| Protein GI | 171462982 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGCGG CGTTGAAAAT AGACACCAAT CGTTTGATTG ACCACTTACA CACACTAGCG
AACTCCTCTG CAAAAGTGTG TGCGGATAGT CGCCAGATTC AGTCTGGCGA TATCTTTTTT
GCCTACCCGG TAGGGCATGG CAATGCCTTA CGCGACGGCC GTCAATTTAT TAATGCTGCC
CTAGAAAATG GAGCAGCTGC GGTAGTCTTT GATCTAAAAG ACATGGACAG TCAGCTTACA
GATCATCCGC AATGCTTTGC AGTAAAAAAT CTTGCGGCAC AAGCGGGTCA GTTGTGCTCC
CAATGGTATG GCCATCCCAG TAAAGAATTA AATATTATTG GCGTTACTGG TACTAATGGA
AAAACCAGTA TTACGCAGTG GCTTGCACAA GCTTTGGATG CTAGCAACCA TCGCACTGCA
GTTTTAGGCA CCTTGGGCAC TGGCTTTCCT GGCGCATTAG TGCAGACTGG CTATACAACA
CCAGATGCTC CAAAGTTACA AACTCAACTA GCCGAGCTAC GCAATGCTGG AGCAAAACAA
GTCGCAATGG AAGTATCTTC CCATGCGCTC CATCAAGAAC GAATTGCTGG AACAGACATT
CAATGCGCAG CATTCACCAA TCTTACGCAG GATCATTTGG ATTACCACGG CAGCATGGGT
GATTATGCTG AGGCAAAAGC GAAGTTATTT CAGCAGGCTG GATTAAAGCA TGCGGTGATT
AATCTAGATG ATGCGTTTGG TCGTGAGTTA GCTATGAATT TGTTGGCTAA AGACGGCATG
AAGGTATGGG CATATGCGTT ATCGCCATCA GCGTTTGAGG GTTTTGAAAA ATTTGGCGAT
AGATTGCAGC GTATTTATGC AAAAGAGACC ACGTTGAGCG GTGCAGGCTA CGATTCCATT
TTTGTTTATG GCAAAGTAGG AAGTGCTCAA TTGCACATCC CATTATTGGG TGAATTCAAT
GTAAGTAATG CTCTTGCAGT TTGGGCAACA TTGCTTTCGC AGGGCATGAG ATGTGAAGTG
GCCGCTCAGA AAGTGAGTCA ATTAAATCCA GTTCTTGGGC GTATGGAGTT AATTCGATTC
GGAAAGCCTC AAAAGGCAGG GAGTTTATTG GCGGTTGTTG ACTACGCACA CACTCCTGAT
GCTTTAGAAA AAACCTTGCA GGCCTTGCGC CCCGTTGCCG ACCAGCGTGG TGGAAAAATT
TGGTGTGTAT TTGGTTGTGG TGGTGATCGA GATGCTGGAA AGCGAGCGCT TATGGGTGCT
GTTGCTGAGC GCAATGCAGA CCACATTCTG ATTACGAGTG ACAATCCGCG CTCGGAAGAC
CCGCAAGCCA TCATGCAGAT GATTCGTGGT GGTATTCAGG CCGAATCACA AAATATTCAG
ATGATTGCTG ATCGTGCGGC CGCTATTATG GCTGCGATTC GTCATGCAGA CGCCCGCGAT
ATTGTCTTGG TTGCCGGCAA AGGTCATGAA ACAACTCAAG AAATCAATGG TAAGAAGTTT
GATTTTTCTG ATCAGGAGCA TATTCGCTTG GCTGCAGGGG GTGGAGTCTG A
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| Protein sequence | MRAALKIDTN RLIDHLHTLA NSSAKVCADS RQIQSGDIFF AYPVGHGNAL RDGRQFINAA
LENGAAAVVF DLKDMDSQLT DHPQCFAVKN LAAQAGQLCS QWYGHPSKEL NIIGVTGTNG
KTSITQWLAQ ALDASNHRTA VLGTLGTGFP GALVQTGYTT PDAPKLQTQL AELRNAGAKQ
VAMEVSSHAL HQERIAGTDI QCAAFTNLTQ DHLDYHGSMG DYAEAKAKLF QQAGLKHAVI
NLDDAFGREL AMNLLAKDGM KVWAYALSPS AFEGFEKFGD RLQRIYAKET TLSGAGYDSI
FVYGKVGSAQ LHIPLLGEFN VSNALAVWAT LLSQGMRCEV AAQKVSQLNP VLGRMELIRF
GKPQKAGSLL AVVDYAHTPD ALEKTLQALR PVADQRGGKI WCVFGCGGDR DAGKRALMGA
VAERNADHIL ITSDNPRSED PQAIMQMIRG GIQAESQNIQ MIADRAAAIM AAIRHADARD
IVLVAGKGHE TTQEINGKKF DFSDQEHIRL AAGGGV
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