Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0175 |
Symbol | |
ID | 6184537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 153188 |
End bp | 154960 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641670895 |
Product | Peptidoglycan glycosyltransferase |
Protein accession | YP_001797094 |
Protein GI | 171462981 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCCGG TAGGTTTTTC CACCACTCCT AACTTAGTGT TGCGTCTGCC AATGTGGCGG TCGCGCTTGA TGCTATTCCT CTTGTTCTTC GTTTTCATGA TGCTATTGTT GCGTGCATTT TGGATTCAGG GCCCAGGAAA TGCATTTTAT GAAGCCAAAG GCGTACGTGG CACTCAACGC GAATTAGAGC TACCCGCTAG CCGTGGAAAA ATTTTGGACC GCAACGGGCA AGTTATTGCC ACCAGTCTGG AGGCGAAGTC AGTCATCGCT TATAATGATG CGGTGCCCGA TGATTTAGCA GCAGATAAAG TTCAGAAGTT AGCAAGTCTT TTGCAAATAA GTGAAGCAGA TTTGCGTAAA AAATTAAAAG AAGAGCGCAA GCAAATCTTT TTAAAGCGTC AGGTAGATCC AGCGGTTGCA CAACAGATTA AGCAGTTGGA AATCCCAGGC ATTGGTTTAA ATAATGAATA TCGTCGCTTC TATCCAGAAG GCGAGGCGAT GGCTCACGTA GTTGGCTTTA CAAACGTCAA CGATAAGGGT CAGGAAGGCA TGGAGCTTTC TCGCGAGAAT GACCTTGCTA GTCATCCTGG TCAAAGACGT GTAGTGGTTG ATCGCTTAGG GCGTGTCGTA GAAGATGTTG CAATCTTGCA GTTGCCGCAA AACGGAAAAG ATTTAAATCT ATCCATTGAT AGCAAAATTC AGTTCTTGGC ATATAACGCT GTGAAAGATG CAGTTGAAAA GCATCACGCT AAGGCGGGCG GTGCTGTCGT ACTTGATACG CAGACCGGTG AAATTTTAGC CTTAGCAAAT TACCCAAGCT ATAACCCGAA TGATCGAAGG TTTTTAACGG GCGAGCAATT ACGTAATCGT GTCTTGACTG ATACTTTTGA GCCAGGCTCA ACTATGAAGC CTTTAACTAT TGCGATTGCT TTAGAGAAGG GTTCTGTTAA GTCGGACACT AATATGGTAA TTGGTGCCAA ATATTTAGTT GGCCCTAAAC CAATCACAGA TACACATCCG TACGGTAACT TAACAGTCGC GCAAATTATT CAAAAGTCTA GCAATATTGG CACCGCAAAA ATTGCTATGA ATAATCTTTC TGCTGAAGAA ATGTGGGATT TCTATACCAC AGTTGGCTTG GGTCAAGCAC CAAAAATTGG CTTCCCCGGT GCCGTTGCTG GAACTGTGCA TCCATTTAAA AAGTGGATGC CTACCGATCA AGCGCGCATT GCATTTGGTT ATGGTATTTC AGCGTCACTC TTTCAGGTGG CGCGTGCTTA CACCGTTTTC GCACGTGATG GCGAGTTGGT TCCTTTGACA ATTGAACGTA GTCCGGAATT TAAGCCGGGT ATTAAGGTTC TTTCTCCAAA AACTGCAATT GAAATGCGCA ACATGATGGA GGCGGTTACT GAGCCTGGTG GCACGGCAAT TAAAGCTCAA GCTGAAGGAT TCCGTGTTGG TGGAAAAACC GGAACAGCGC ATAAATTAGT TGGCAAGGGT TATAGCAATA AATACCGTGC ATACTTTGCG GGGTTGGCAC CAATCAGTGC GCCACGCATT GTTGTAGCGG TGATGATTGA TGAGCCTACT GGTGGCAGTC ACTACGGTGG TGATGTGGCG GCGCCAGTGT TTTCGACAAT TGTGAGCGAA ACATTACATA CTTTAAATGT TTTGCCGGAT AGCAAAGTCA AGCAAATGGT ATTGCAGGAT AAGAGTTCTC AGGAGATTCA AACTGCAAAT GCTCAAGCTC AACATGTGGT TTTGAAGCGA TGA
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Protein sequence | MRPVGFSTTP NLVLRLPMWR SRLMLFLLFF VFMMLLLRAF WIQGPGNAFY EAKGVRGTQR ELELPASRGK ILDRNGQVIA TSLEAKSVIA YNDAVPDDLA ADKVQKLASL LQISEADLRK KLKEERKQIF LKRQVDPAVA QQIKQLEIPG IGLNNEYRRF YPEGEAMAHV VGFTNVNDKG QEGMELSREN DLASHPGQRR VVVDRLGRVV EDVAILQLPQ NGKDLNLSID SKIQFLAYNA VKDAVEKHHA KAGGAVVLDT QTGEILALAN YPSYNPNDRR FLTGEQLRNR VLTDTFEPGS TMKPLTIAIA LEKGSVKSDT NMVIGAKYLV GPKPITDTHP YGNLTVAQII QKSSNIGTAK IAMNNLSAEE MWDFYTTVGL GQAPKIGFPG AVAGTVHPFK KWMPTDQARI AFGYGISASL FQVARAYTVF ARDGELVPLT IERSPEFKPG IKVLSPKTAI EMRNMMEAVT EPGGTAIKAQ AEGFRVGGKT GTAHKLVGKG YSNKYRAYFA GLAPISAPRI VVAVMIDEPT GGSHYGGDVA APVFSTIVSE TLHTLNVLPD SKVKQMVLQD KSSQEIQTAN AQAQHVVLKR
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