Gene Pnec_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0175 
Symbol 
ID6184537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp153188 
End bp154960 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content45% 
IMG OID641670895 
ProductPeptidoglycan glycosyltransferase 
Protein accessionYP_001797094 
Protein GI171462981 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCGG TAGGTTTTTC CACCACTCCT AACTTAGTGT TGCGTCTGCC AATGTGGCGG 
TCGCGCTTGA TGCTATTCCT CTTGTTCTTC GTTTTCATGA TGCTATTGTT GCGTGCATTT
TGGATTCAGG GCCCAGGAAA TGCATTTTAT GAAGCCAAAG GCGTACGTGG CACTCAACGC
GAATTAGAGC TACCCGCTAG CCGTGGAAAA ATTTTGGACC GCAACGGGCA AGTTATTGCC
ACCAGTCTGG AGGCGAAGTC AGTCATCGCT TATAATGATG CGGTGCCCGA TGATTTAGCA
GCAGATAAAG TTCAGAAGTT AGCAAGTCTT TTGCAAATAA GTGAAGCAGA TTTGCGTAAA
AAATTAAAAG AAGAGCGCAA GCAAATCTTT TTAAAGCGTC AGGTAGATCC AGCGGTTGCA
CAACAGATTA AGCAGTTGGA AATCCCAGGC ATTGGTTTAA ATAATGAATA TCGTCGCTTC
TATCCAGAAG GCGAGGCGAT GGCTCACGTA GTTGGCTTTA CAAACGTCAA CGATAAGGGT
CAGGAAGGCA TGGAGCTTTC TCGCGAGAAT GACCTTGCTA GTCATCCTGG TCAAAGACGT
GTAGTGGTTG ATCGCTTAGG GCGTGTCGTA GAAGATGTTG CAATCTTGCA GTTGCCGCAA
AACGGAAAAG ATTTAAATCT ATCCATTGAT AGCAAAATTC AGTTCTTGGC ATATAACGCT
GTGAAAGATG CAGTTGAAAA GCATCACGCT AAGGCGGGCG GTGCTGTCGT ACTTGATACG
CAGACCGGTG AAATTTTAGC CTTAGCAAAT TACCCAAGCT ATAACCCGAA TGATCGAAGG
TTTTTAACGG GCGAGCAATT ACGTAATCGT GTCTTGACTG ATACTTTTGA GCCAGGCTCA
ACTATGAAGC CTTTAACTAT TGCGATTGCT TTAGAGAAGG GTTCTGTTAA GTCGGACACT
AATATGGTAA TTGGTGCCAA ATATTTAGTT GGCCCTAAAC CAATCACAGA TACACATCCG
TACGGTAACT TAACAGTCGC GCAAATTATT CAAAAGTCTA GCAATATTGG CACCGCAAAA
ATTGCTATGA ATAATCTTTC TGCTGAAGAA ATGTGGGATT TCTATACCAC AGTTGGCTTG
GGTCAAGCAC CAAAAATTGG CTTCCCCGGT GCCGTTGCTG GAACTGTGCA TCCATTTAAA
AAGTGGATGC CTACCGATCA AGCGCGCATT GCATTTGGTT ATGGTATTTC AGCGTCACTC
TTTCAGGTGG CGCGTGCTTA CACCGTTTTC GCACGTGATG GCGAGTTGGT TCCTTTGACA
ATTGAACGTA GTCCGGAATT TAAGCCGGGT ATTAAGGTTC TTTCTCCAAA AACTGCAATT
GAAATGCGCA ACATGATGGA GGCGGTTACT GAGCCTGGTG GCACGGCAAT TAAAGCTCAA
GCTGAAGGAT TCCGTGTTGG TGGAAAAACC GGAACAGCGC ATAAATTAGT TGGCAAGGGT
TATAGCAATA AATACCGTGC ATACTTTGCG GGGTTGGCAC CAATCAGTGC GCCACGCATT
GTTGTAGCGG TGATGATTGA TGAGCCTACT GGTGGCAGTC ACTACGGTGG TGATGTGGCG
GCGCCAGTGT TTTCGACAAT TGTGAGCGAA ACATTACATA CTTTAAATGT TTTGCCGGAT
AGCAAAGTCA AGCAAATGGT ATTGCAGGAT AAGAGTTCTC AGGAGATTCA AACTGCAAAT
GCTCAAGCTC AACATGTGGT TTTGAAGCGA TGA
 
Protein sequence
MRPVGFSTTP NLVLRLPMWR SRLMLFLLFF VFMMLLLRAF WIQGPGNAFY EAKGVRGTQR 
ELELPASRGK ILDRNGQVIA TSLEAKSVIA YNDAVPDDLA ADKVQKLASL LQISEADLRK
KLKEERKQIF LKRQVDPAVA QQIKQLEIPG IGLNNEYRRF YPEGEAMAHV VGFTNVNDKG
QEGMELSREN DLASHPGQRR VVVDRLGRVV EDVAILQLPQ NGKDLNLSID SKIQFLAYNA
VKDAVEKHHA KAGGAVVLDT QTGEILALAN YPSYNPNDRR FLTGEQLRNR VLTDTFEPGS
TMKPLTIAIA LEKGSVKSDT NMVIGAKYLV GPKPITDTHP YGNLTVAQII QKSSNIGTAK
IAMNNLSAEE MWDFYTTVGL GQAPKIGFPG AVAGTVHPFK KWMPTDQARI AFGYGISASL
FQVARAYTVF ARDGELVPLT IERSPEFKPG IKVLSPKTAI EMRNMMEAVT EPGGTAIKAQ
AEGFRVGGKT GTAHKLVGKG YSNKYRAYFA GLAPISAPRI VVAVMIDEPT GGSHYGGDVA
APVFSTIVSE TLHTLNVLPD SKVKQMVLQD KSSQEIQTAN AQAQHVVLKR