| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0163 |
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| Symbol | |
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| ID | 6184000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 143023 |
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| End bp | 143748 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670887 |
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| Product | Ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001797086 |
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| Protein GI | 171462973 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.468376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAGCC AAAAAACATC CTCAAATAAT CAATTTGTGA TTGCCCCATC GATTTTGTCG
GCCGACTTCG CCTGCCTAGG CAAGGAAGTG CAGGACGTTT TAGTAGCAGG CGCTGATTGG
ATTCACTTTG ATGTGATGGA TAACCACTAT GTACCCAATC TCACTATTGG CCCCTTGGTT
TGTGAGGCCA TTCGCCCCTA TGCCAACAAA GATGGCAAGC CAACAGTGAT TGACGTGCAC
TTAATGATCG AGCCAGTAGA TCGAATTGTT CCTGATTTTG CCAAAGCGGG CGCAAACTTC
ATTAGCTTTC ATCCCGAGGC AAGTCCCCAC GTCAATCGCA CTCTGAACCT CATTCGCGAT
CAAGGTTGTC AAGCGGGCCT CGTACTCAAT CCGGCTACAC CACTTGATCA CCTCGATCAC
ACTTTGGAAT TGATTGATCT CGTATTACTC ATGTCAGTCA ATCCAGGATT TGGTGGCCAG
TCATTCATCT CAAGTACTCT CAATAAGATT GCTCAAGTTC GAGCACGCTT AGATCGTTAC
CAAGCAGAGA CTGGTCGACA CATTCGTCTT GAAGTAGATG GCGGAATTAA AGTCGACAAC
ATCGCCGAAG TGGCAAAAGC GGGTGCCGAC ACTTTTGTTG CTGGCTCAGC GATTTACGGC
AAAGAGAATT ACGCAGACGT AATCACAACA ATGCGTGCTG AATTAGGAAA GTCAGGAAGA
GTCTAA
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| Protein sequence | MESQKTSSNN QFVIAPSILS ADFACLGKEV QDVLVAGADW IHFDVMDNHY VPNLTIGPLV
CEAIRPYANK DGKPTVIDVH LMIEPVDRIV PDFAKAGANF ISFHPEASPH VNRTLNLIRD
QGCQAGLVLN PATPLDHLDH TLELIDLVLL MSVNPGFGGQ SFISSTLNKI AQVRARLDRY
QAETGRHIRL EVDGGIKVDN IAEVAKAGAD TFVAGSAIYG KENYADVITT MRAELGKSGR
V
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