| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0160 |
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| Symbol | trpD |
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| ID | 6184118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 139922 |
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| End bp | 140947 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641670884 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001797083 |
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| Protein GI | 171462970 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATCA CTCCGCAAGA AGCCTTACAA CGCTGTATTG AACACCGTGA ACTTTTTCAT
GATGAAATGA CAGCGATGAT GCGCCTCATC ATGAGTGGTG AGATGTCGCC AGAGCTGGTT
GCAGGATTGT TGATTGCCCT ACGCACCAAA AAAGAAACGG TTGGTGAAAT CGCTGCTGCT
GCTCAAGTAA TGCGCGAGTT TGCAACCTCA GTACAGGTAG ATGACCGCAC TCATTTAGTC
GATGTAGTTG GTACGGGTGG CGATGGCGCA CACACATTTA ACATCTCCAC AGCGGCGATG
TTTGTGGCAG CAGGTACAGG AGCAAAGATT GCTAAACACG GCAATCGCAG CGTGAGCAGT
AAATCTGGCA GCGCAGATGT TTTAGAGGCG CTTGGCGTAA ATCTAGCACT GTCCGCTGAT
CAAGTAGCCA AATGCATCTC AACAGTAGGT ACAGGATTCA TGTTTGCACC AAACCATCAT
CCAGCAATGA AGAATGTAGT ACCGATTCGA AAGCAGCTGG GTGTTCGTAC GATCTTCAAT
ATCCTAGGAC CCCTCACTAA TCCTGCGGAT GCCAAACGTA TTTTGATGGG TGTATTTCAT
CCTGATCTCG TGGGCATTCA AGCACGCGTC TTGCAAGCAC TAGGGATGGA ACATGCCCTA
GTTGTTTATG GACGCGGTGG TCTTGATGAG ATCTCTTTAG GGGGGCCAAC TTTGGTTGGC
GAGCTCAAAG ACGGCGTAGT TCGTGAGTAT GAGATTCACC CAAAAGATTT TGGATTAAAT
ACAGCACCTA CTAATAGTTT CAAAGTGGCA AATGCAGAAG AATCCAAGAA GATAGTCTTA
GACGTCCTTG ATGGCAAGCC AGGCCCGGCA AGCGACATCG TCTGCCTCAA TGCAGGCGCG
ACACTTTACG TTGCTGGCAT TGCCAAAAGT ATTGCCAGCG GTATTGCATT AGCCAAGACT
GCCATTACTT CTGGAGCTGC ACGCCAAAAA CTAGATACAT TTGTAGTAAC AACTCAATCC
AAATAA
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| Protein sequence | MSITPQEALQ RCIEHRELFH DEMTAMMRLI MSGEMSPELV AGLLIALRTK KETVGEIAAA
AQVMREFATS VQVDDRTHLV DVVGTGGDGA HTFNISTAAM FVAAGTGAKI AKHGNRSVSS
KSGSADVLEA LGVNLALSAD QVAKCISTVG TGFMFAPNHH PAMKNVVPIR KQLGVRTIFN
ILGPLTNPAD AKRILMGVFH PDLVGIQARV LQALGMEHAL VVYGRGGLDE ISLGGPTLVG
ELKDGVVREY EIHPKDFGLN TAPTNSFKVA NAEESKKIVL DVLDGKPGPA SDIVCLNAGA
TLYVAGIAKS IASGIALAKT AITSGAARQK LDTFVVTTQS K
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