| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0159 |
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| Symbol | trpC |
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| ID | 6183115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 139108 |
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| End bp | 139911 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641670883 |
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| Product | indole-3-glycerol-phosphate synthase |
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| Protein accession | YP_001797082 |
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| Protein GI | 171462969 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.927898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATA TCCTCAACAA AATTGTTGCA ACTAAAAAGA TTGAGGTTGC CAACCGACTT
AAGCAGGTAT CACTTGCCAA TCAACGTGCA CAGGCTGAAG CAAATAATCA AGATGTCCTC
CTAAAACCAA GAGGCTTTAT TCAAGCCATT GAAAAAAAGA TCACCGCCGG AAAAGCTGCA
GTGATCACTG AAATTAAGAA GGCCAGCCCA AGCAGGGGAA TATTGCGTGA GCTCTTCGTG
CCGACAGATA TTGCCCAGTC CTACGAGAAA CACGGAGCTG CCTGTTTATC GGTTCTAACT
GATGCGGATT ATTTTCAAGG CTGCAACGAC TACCTTCAGC AGGCTCGTGC CGCTTGTAGC
ATTCCCGTTC TACGCAAAGA CTTCACCATA GATCCATATC AAGTGTATGA GGCTCGCGCC
ATTGGCGCAG ATGCAATCTT ATTAATTGTG GCCTACTTAG AGCTCAATCA AATGAAAGAT
TTAGAGGCAT GTGCAAATGA GCTGGGCTTA GATGTATTGG TTGAAGTTCA CAACGCTTCT
GAATTAGAGC AAGCACTTGA ACTCAAGACA CCATTACTTG GCATTAACAA CCGAAATCTC
AAAACGTTTG AAGTAACACT ACAAAATACC CTCTCACTTT TATCGATGGT TCCTAACGAC
AAAACTTTAG TAACCGAGTC TGGGATATTG AGTCATACTG ATGTTCAGCT AATGCGCGAT
CATCATGTGA ATGCTTTCTT GGTGGGCGAA GCCTTTATGC GTGCCGCCGA TCCAGGCGCT
GCACTTAGTG AGCTGTTTTC CTGA
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| Protein sequence | MSNILNKIVA TKKIEVANRL KQVSLANQRA QAEANNQDVL LKPRGFIQAI EKKITAGKAA
VITEIKKASP SRGILRELFV PTDIAQSYEK HGAACLSVLT DADYFQGCND YLQQARAACS
IPVLRKDFTI DPYQVYEARA IGADAILLIV AYLELNQMKD LEACANELGL DVLVEVHNAS
ELEQALELKT PLLGINNRNL KTFEVTLQNT LSLLSMVPND KTLVTESGIL SHTDVQLMRD
HHVNAFLVGE AFMRAADPGA ALSELFS
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