| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0153 |
|---|
| Symbol | |
|---|
| ID | 6184453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 134900 |
|---|
| End bp | 135616 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641670877 |
|---|
| Product | putative thiol:disulfide interchange protein |
|---|
| Protein accession | YP_001797076 |
|---|
| Protein GI | 171462963 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1651] Protein-disulfide isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 0.313521 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATAAAT CCTTATCTGT GATTGCCCTT ATTACTGCGG CACTATTCTG CACTGGATCA
GCCCTTGCGC AACCAGAACA GCAAATAAAA ACGGAAATTC AAAAAAAACT AGGGTCGAAT
GTCAAAGTAA AAAGTATTTC ACCCGCGCCG ATATCAGGCC TATATGAAGT ATTGGTTGGA
AATGATATTT TTTATGCGGA TGTATCTGGA AAATATCTCA TTCAAGGCGA GATCATTGAG
CTTGCTACTG GTAAAAATAT TACCGAACAA AGACAGGCAG ACTTAAATCG CATTAAATGG
AGTGACTTAA GTCCTGCGAA TGCCATCAAA TACGTGCGCG GCAATGGCAG TCGTCAGCTG
GCTGTTTTTT CTGACCCCAA TTGTGGTCAC TGCAAGCGCT TAGAAAAATT GCTACAGCAA
TTAGAGAACG TCATAATCTA CACTTACCTC ATCCCAATTC TATCGTCAGA TTCTGCGCAA
AAATCCAAAC AAATTTGGTG TTCTGCCGAC CCATATAAGG CCTATATAGA TTGGATGATT
AATGGCATTA CACCCAGCGG CAAGGGTGAG TGTAATACGC CATTAGACAA AAACATGGCT
TTTGCAAAGA CCTATGGGAT TACAGGTACG CCGACTTTAT TTTTTACTGA CGGTAGTCGC
TTTCCTGGTG CAGTACAAAT TACCGACATT GAAAAGAAAT TTAATTCTCT GAAATAA
|
|---|
| Protein sequence | MNKSLSVIAL ITAALFCTGS ALAQPEQQIK TEIQKKLGSN VKVKSISPAP ISGLYEVLVG
NDIFYADVSG KYLIQGEIIE LATGKNITEQ RQADLNRIKW SDLSPANAIK YVRGNGSRQL
AVFSDPNCGH CKRLEKLLQQ LENVIIYTYL IPILSSDSAQ KSKQIWCSAD PYKAYIDWMI
NGITPSGKGE CNTPLDKNMA FAKTYGITGT PTLFFTDGSR FPGAVQITDI EKKFNSLK
|
|---|
| |