| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0148 |
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| Symbol | prfA |
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| ID | 6184159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 129649 |
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| End bp | 130728 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641670872 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_001797071 |
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| Protein GI | 171462958 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.570569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.18601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCA GCATGCGGGC TAAGCTAGAC CACCTGGACA CGCGCTTAGC CGAACTTAAT
TCCCTATTAA CTTCAGAAGA AGCAACCAAA GATATGGATG CCTACAGGAA GCTTACGCGT
GAACATTCCG ATATTGCTAC TGTAGTTGAG CAATTTTACC TGTATAAGCA AGCTGAGGCA
GACGCTCAAG CCGCAGAAGA AATGCGCAAA GATCCGGAAA TGAAAGAGTT TGCAGATGAA
GAGCAAAAAC AAGCATTAGC TACGATGGAG GCACTTGAGA GCACACTCCA AAAGCTCTTA
CTTCCTAAAG ATGAAAACGA TGAACGTAAC GTATTCTTAG AAATTCGTGC GGGCACTGGC
GGAGATGAGG GTGCGCTATT TGCTGGTGAT CTTTTACGAA TGTATACGCG CTTTGCTGAA
CGTCAAGGCT GGAAAGTAGA AGTTGTCAGC GCCGCTGAAT CTGACCTAGG TGGATATAAA
GAAGTGGTCT TGCGTCTAGT CGGCCAAGCG GTTTATTCAC GCTTGAAGTT TGAATCTGGC
GGTCATCGCG TTCAACGAGT TCCGCAAACA GAAACCCAAG GCCGTATCCA CACATCCGCT
TGTACTGTTG CTGTAATGCC CGAGACAGAT GAACTTGAGG CAGTCAAAAT TAATCCCGCA
GAGCTTCGCA TTGATACCTT CCGCGCCTCT GGGGCTGGCG GACAACATAT TAATAAAACC
GACTCTGCGA TACGTATCAC CCACTTACCC ACAGGCACAG TAGTGGAGTG CCAAGACGAT
CGTAGCCAAC ATCGCAATCG CGAGCAAGCC ATGAAAGTAT TGGTTTCTCG CATCATGGAT
GCTCGTGAAC GTGAGAAGCA TCAACTCGAA GCACAGACTC GCAAGTCCCT TGTTGGAACA
GGCGATCGAA GTGATCGCAT CCGAACTTAC AACTTCCCTC AAGGTCGCAT TACCGATCAC
CGCATCAATC TGACACTTTA TAAAATCGAT GCAATGATGG ATGGTGACAT AGACGACCTA
TGTAATGCTC TTGCCTCTGA GCATCAAGCA GAGTTACTAG CAGCACTCGG CGATAACTAA
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| Protein sequence | MKPSMRAKLD HLDTRLAELN SLLTSEEATK DMDAYRKLTR EHSDIATVVE QFYLYKQAEA
DAQAAEEMRK DPEMKEFADE EQKQALATME ALESTLQKLL LPKDENDERN VFLEIRAGTG
GDEGALFAGD LLRMYTRFAE RQGWKVEVVS AAESDLGGYK EVVLRLVGQA VYSRLKFESG
GHRVQRVPQT ETQGRIHTSA CTVAVMPETD ELEAVKINPA ELRIDTFRAS GAGGQHINKT
DSAIRITHLP TGTVVECQDD RSQHRNREQA MKVLVSRIMD AREREKHQLE AQTRKSLVGT
GDRSDRIRTY NFPQGRITDH RINLTLYKID AMMDGDIDDL CNALASEHQA ELLAALGDN
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