Gene Pnec_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0139 
Symbol 
ID6183602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp121672 
End bp122079 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content49% 
IMG OID641670864 
ProductStringent starvation protein B 
Protein accessionYP_001797064 
Protein GI171462951 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.253376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.0968579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAACG TCCCAAGCAA CAAACCCTAC CTAATCCGTG CCCTACATCA GTGGTGCACG 
GATTTTGGTT TTACGCCCTT CATGGCTGTT TTTGTCGATG CCAGGGTGGA AGTGCCTATG
GAGTTTGTAA AAAACGATGA GATTGTTCTC AATCTGTCCC TGGAGGCATG TTATCAGCTG
CAGATGGAGA ACGACTGGAT CAGCTTCCAG GCGAGATTTG GGGGTATTCC CAGAAAGGTT
ATGGTTCCCG TTAGCCATGT CTTGGCTATT TATGCCAGGG AAAATGGCCA GGGCATGTCT
TTCCCATTTG ACCCCGCTCA GGCCCGCGAT CTTCATATTG CAGATTCCGG GGATCAGAAC
CCAGAAAAAC CAAAAACAAG CAGACCTAGC TTGAGGATTG TGAAATAG
 
Protein sequence
MSNVPSNKPY LIRALHQWCT DFGFTPFMAV FVDARVEVPM EFVKNDEIVL NLSLEACYQL 
QMENDWISFQ ARFGGIPRKV MVPVSHVLAI YARENGQGMS FPFDPAQARD LHIADSGDQN
PEKPKTSRPS LRIVK