Gene Pnec_0135 details

Gene Information

• Locus tag: Pnec_0135
• ID: 6184506
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. necessarius STIR1
• Kingdom: Bacteria
• Replicon accession: NC_010531
• Strand: +
• Start bp: 118113
• End bp: 118715
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641670860
• Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit
• Protein accession: YP_001797060
• Protein GI: 171462947
• COG category: [C] Energy production and conversion
• COG ID: [COG0723] Rieske Fe-S protein
• TIGRFAM ID: [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 58
• Fosmid unclonability p-value: 0.139518
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTGACA AGCCCTGTAT GGACAAGGAT CGCCGTAATT GGTTGATCGC CACTTCGGCG 
GTTGGTGGCG TAGGCGCCGC CGCAGCCTTT TATCCTTTTG TAGACAGTTT CGAGCCTTCT 
GAGCGTGCGA AAGCCGCTGG AGCTGCTGTT GAAATCGATA TCGCTGGCAT GCAGCCAGAC 
GAGATGAGAA TGGTTGAATG GCGCGGTAAG CCTGTTTGGG TGGTTCGCCG TACTCTAGAA 
CAAGTTGCTG AGTTATCAAA AATTGATGGC GAATTGGCAG ATCCAGATTC ATTTCGTGAT 
CCAGCTCAAT TCACGCCGCC TTATGCTCAA AATCAGTGGC GCTCAATTAA GCCTGAGTAC 
CTTGTAGTTG TTGGTATTTG CACCCACTTA GGTTGCTCAC CAACGCCAAA ATTTGAAGCC 
GGTGCACAAC CATCCTTGCC GAATACTTGG CCAGGTGGCT TCCTTTGCCC TTGTCACGGT 
TCTACATTCG ACATGGCAGG CCGCGTATTT AAAAATAAAC CAGCCCCAGA TAACCTTGAA 
GTGCCGCCAC ACATGTATTT AAGCGACACC AAGATTCTGA TCGGCGATGA TAAGAAGGTC 
TAA 

 

Protein sequence

MSDKPCMDKD RRNWLIATSA VGGVGAAAAF YPFVDSFEPS ERAKAAGAAV EIDIAGMQPD 
EMRMVEWRGK PVWVVRRTLE QVAELSKIDG ELADPDSFRD PAQFTPPYAQ NQWRSIKPEY 
LVVVGICTHL GCSPTPKFEA GAQPSLPNTW PGGFLCPCHG STFDMAGRVF KNKPAPDNLE 
VPPHMYLSDT KILIGDDKKV