| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0130 |
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| Symbol | |
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| ID | 6184243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 115086 |
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| End bp | 115562 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641670857 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001797057 |
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| Protein GI | 171462944 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.082813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTCCA TTCCGCTGGT GATGGTCATT CTCTGGTTCT TCCTATTAAT TCCAATGTTG
ATTGGTAGGT CGATTGGGGC AGACTTATTT GCCACTATTA CCTTCATTGC ATTTGAGGCG
GCATTCTTTT CAGAGATCGT TAGAGCCGGT ATTCAGTCGG TTCCCAAAGG GCAGATTTAT
GCGGGCGAAG CTCTGGGAAT GACCTACGGT CAAAATATGC GCTTAGTTTT TTTGCCGCAA
GCATTCCGAA ATGTGATTCC AGTCTTTATG ACGCAGACCA TCATCTTGTT CCAGAATACT
TCTTTGGTCT ATGCAATTGG AGCCTACGAT TTATTAAAAG GTTTTGAGAT TGCTGGAAAA
AATTACGGCC GTCCTATCGA GACTTACATT TTGGCCGCTG CTACGTATTT CATTATCTGC
TTTTCATTGT CTAAAGCAGT GCGTGCTATT CAGGCAAAAG TCGCCATTAT TCGTTAA
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| Protein sequence | MRSIPLVMVI LWFFLLIPML IGRSIGADLF ATITFIAFEA AFFSEIVRAG IQSVPKGQIY
AGEALGMTYG QNMRLVFLPQ AFRNVIPVFM TQTIILFQNT SLVYAIGAYD LLKGFEIAGK
NYGRPIETYI LAAATYFIIC FSLSKAVRAI QAKVAIIR
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