| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0117 |
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| Symbol | |
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| ID | 6184400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 105316 |
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| End bp | 106107 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641670850 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001797050 |
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| Protein GI | 171462937 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.433912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAA ATAATTCAAC TGAAGAATCG GGATTACAAG AGACATTCTT ATCCCACTTA
TTTGAATTAC GTGATCGCGT AATTAAATCA GCGCTCGCAA TTATTGTTGT CTTTGTTTGC
TTGGTGTACT GGGCACCTGA TATTTTTCAT TTATTTGCAC AGCCTTTATT GGAAGCATTG
CCTGCTGGCG GCAAGATGAT AGTGACGGAT GTCACGGGAT CATTTTTTGT TCCCATGAAA
GTCACCATGC TGGTGGCATT TCTGATTGCA TTGCCGGTGG TGATGTATCA GCTCTGGGCT
TTCATTGCAC CTGGCCTATA TTTGCACGAA AGAAAACTCA TTCTGCCTTT GGTGGTTAGC
AGCTATACCT TATTCATTAT CGGCATGGCC TTTGCTTACT TCTTGGTGTT TCCTACGGTA
TTTAAGTTCA TGGCTAGTTA TAACGCTCCT TTGGGTGCGG AGATGTCTAC AGACATTGAT
AACTATTTAA GCTTTGCCAT GACCACCTTC TTGGCATTTG GTATTACCTT TGAGGTTCCG
GTAGTAGTGG TGGTCTTAGT ACGCATGGGC ATTGTTCCTT TGGCCAAGCT TAGGGAAATC
CGCCCTTATG TCATTGTGGG CGCTTTTGTG ATTTCCGCAG TAGTGACACC GCCCGATGTG
CTCTCTCAAT TACTTCTAGC GGTGCCGATG ACACTGCTTT ATGAATTGGG GCTCTTGATT
GCTCGTCTCT ATGTACCAAA GCCTTCCGAT GAAGACGTCG CCAAAGATCA ATCGACTGCA
GCGTCTGCTT GA
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| Protein sequence | MTENNSTEES GLQETFLSHL FELRDRVIKS ALAIIVVFVC LVYWAPDIFH LFAQPLLEAL
PAGGKMIVTD VTGSFFVPMK VTMLVAFLIA LPVVMYQLWA FIAPGLYLHE RKLILPLVVS
SYTLFIIGMA FAYFLVFPTV FKFMASYNAP LGAEMSTDID NYLSFAMTTF LAFGITFEVP
VVVVVLVRMG IVPLAKLREI RPYVIVGAFV ISAVVTPPDV LSQLLLAVPM TLLYELGLLI
ARLYVPKPSD EDVAKDQSTA ASA
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